summaryrefslogtreecommitdiff
path: root/var
diff options
context:
space:
mode:
authorAdam J. Stewart <ajstewart426@gmail.com>2018-07-12 00:28:11 -0500
committerMassimiliano Culpo <massimiliano.culpo@gmail.com>2018-07-12 07:28:11 +0200
commitecff47538e7064c7c5529abf0213a1c9378c6010 (patch)
treec38808f7bdbdb7f46fd1046cfcbafb7524598c44 /var
parent2561d1d6565fed0754518d66d877404f7f4d2da0 (diff)
downloadspack-ecff47538e7064c7c5529abf0213a1c9378c6010.tar.gz
spack-ecff47538e7064c7c5529abf0213a1c9378c6010.tar.bz2
spack-ecff47538e7064c7c5529abf0213a1c9378c6010.tar.xz
spack-ecff47538e7064c7c5529abf0213a1c9378c6010.zip
Remove unnecessary version-specific URL overrides (#8693)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/bwa/package.py12
-rw-r--r--var/spack/repos/builtin/packages/jellyfish/package.py3
-rw-r--r--var/spack/repos/builtin/packages/py-backports-functools-lru-cache/package.py7
-rw-r--r--var/spack/repos/builtin/packages/py-scipy/package.py4
-rw-r--r--var/spack/repos/builtin/packages/star/package.py3
5 files changed, 10 insertions, 19 deletions
diff --git a/var/spack/repos/builtin/packages/bwa/package.py b/var/spack/repos/builtin/packages/bwa/package.py
index ffbab1fedf..f070d12611 100644
--- a/var/spack/repos/builtin/packages/bwa/package.py
+++ b/var/spack/repos/builtin/packages/bwa/package.py
@@ -31,14 +31,10 @@ class Bwa(Package):
homepage = "http://github.com/lh3/bwa"
url = "https://github.com/lh3/bwa/releases/download/v0.7.15/bwa-0.7.15.tar.bz2"
- version('0.7.17', '82cba7ef695538e6a38b9d4156837381',
- url="https://github.com/lh3/bwa/releases/download/v0.7.17/bwa-0.7.17.tar.bz2")
- version('0.7.16a', 'c5115c9a5ea0406848500e4b23a7708c',
- url="https://github.com/lh3/bwa/releases/download/v0.7.16/bwa-0.7.16a.tar.bz2")
- version('0.7.15', 'fcf470a46a1dbe2f96a1c5b87c530554',
- url="https://github.com/lh3/bwa/releases/download/v0.7.15/bwa-0.7.15.tar.bz2")
- version('0.7.13', 'f094f609438511766c434178a3635ab4',
- url="https://github.com/lh3/bwa/releases/download/v0.7.13/bwa-0.7.13.tar.bz2")
+ version('0.7.17', '82cba7ef695538e6a38b9d4156837381')
+ version('0.7.16a', 'c5115c9a5ea0406848500e4b23a7708c')
+ version('0.7.15', 'fcf470a46a1dbe2f96a1c5b87c530554')
+ version('0.7.13', 'f094f609438511766c434178a3635ab4')
version('0.7.12', 'e24a587baaad411d5da89516ad7a261a',
url='https://github.com/lh3/bwa/archive/0.7.12.tar.gz')
diff --git a/var/spack/repos/builtin/packages/jellyfish/package.py b/var/spack/repos/builtin/packages/jellyfish/package.py
index 41f5830c50..e3c31566c1 100644
--- a/var/spack/repos/builtin/packages/jellyfish/package.py
+++ b/var/spack/repos/builtin/packages/jellyfish/package.py
@@ -33,8 +33,7 @@ class Jellyfish(AutotoolsPackage):
url = "https://github.com/gmarcais/Jellyfish/releases/download/v2.2.7/jellyfish-2.2.7.tar.gz"
list_url = "http://www.cbcb.umd.edu/software/jellyfish/"
- version('2.2.7', 'f741192d9061f28e34cb67c86a1027ab',
- url='https://github.com/gmarcais/Jellyfish/releases/download/v2.2.7/jellyfish-2.2.7.tar.gz')
+ version('2.2.7', 'f741192d9061f28e34cb67c86a1027ab')
version('1.1.11', 'dc994ea8b0896156500ea8c648f24846',
url='http://www.cbcb.umd.edu/software/jellyfish/jellyfish-1.1.11.tar.gz')
diff --git a/var/spack/repos/builtin/packages/py-backports-functools-lru-cache/package.py b/var/spack/repos/builtin/packages/py-backports-functools-lru-cache/package.py
index a57434f65a..8fd37a7400 100644
--- a/var/spack/repos/builtin/packages/py-backports-functools-lru-cache/package.py
+++ b/var/spack/repos/builtin/packages/py-backports-functools-lru-cache/package.py
@@ -31,12 +31,11 @@ class PyBackportsFunctoolsLruCache(PythonPackage):
homepage = "https://github.com/jaraco/backports.functools_lru_cache"
url = "https://pypi.io/packages/source/b/backports.functools_lru_cache/backports.functools_lru_cache-1.4.tar.gz"
- version('1.5', '20f53f54cd3f04b3346ce75a54959754',
- url="https://pypi.io/packages/source/b/backports.functools_lru_cache/backports.functools_lru_cache-1.5.tar.gz")
- version('1.4', 'b954e7d5e2ca0f0f66ad2ed12ba800e5',
- url="https://pypi.io/packages/source/b/backports.functools_lru_cache/backports.functools_lru_cache-1.4.tar.gz")
+ version('1.5', '20f53f54cd3f04b3346ce75a54959754')
+ version('1.4', 'b954e7d5e2ca0f0f66ad2ed12ba800e5')
version('1.0.1', 'c789ef439d189330b99872746a6d9e85',
url="https://pypi.io/packages/source/b/backports.functools_lru_cache/backports.functools_lru_cache-1.0.1.zip")
+
depends_on('py-setuptools', type='build')
depends_on('py-setuptools-scm@1.15.0:', type='build')
depends_on('python@2.6.0:3.3.99', type=('build', 'run'))
diff --git a/var/spack/repos/builtin/packages/py-scipy/package.py b/var/spack/repos/builtin/packages/py-scipy/package.py
index cdcd886ecc..7aba6223ef 100644
--- a/var/spack/repos/builtin/packages/py-scipy/package.py
+++ b/var/spack/repos/builtin/packages/py-scipy/package.py
@@ -51,9 +51,7 @@ class PyScipy(PythonPackage):
version('1.1.0', 'aa6bcc85276b6f25e17bcfc4dede8718')
version('1.0.0', '53fa34bd3733a9a4216842b6000f7316')
- # See https://github.com/spack/spack/issues/2737
- version('0.19.1', '6b4d91b62f1926282b127194a06b72b3',
- url="https://pypi.io/packages/source/s/scipy/scipy-0.19.1.tar.gz")
+ version('0.19.1', '6b4d91b62f1926282b127194a06b72b3')
version('0.19.0', '91b8396231eec780222a57703d3ec550',
url="https://pypi.io/packages/source/s/scipy/scipy-0.19.0.zip")
version('0.18.1', '5fb5fb7ccb113ab3a039702b6c2f3327')
diff --git a/var/spack/repos/builtin/packages/star/package.py b/var/spack/repos/builtin/packages/star/package.py
index 896b775d9a..76d4604eaa 100644
--- a/var/spack/repos/builtin/packages/star/package.py
+++ b/var/spack/repos/builtin/packages/star/package.py
@@ -31,8 +31,7 @@ class Star(Package):
homepage = "https://github.com/alexdobin/STAR"
url = "https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz"
- version('2.5.3a', 'baf8d1b62a50482cfa13acb7652dc391',
- url='https://github.com/alexdobin/STAR/archive/2.5.3a.tar.gz')
+ version('2.5.3a', 'baf8d1b62a50482cfa13acb7652dc391')
version('2.4.2a', '8b9345f2685a5ec30731e0868e86d506',
url='https://github.com/alexdobin/STAR/archive/STAR_2.4.2a.tar.gz')