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| author | lingnanyuan <1297162327@qq.com> | 2017-10-27 01:16:04 -0500 |
|---|---|---|
| committer | Massimiliano Culpo <massimiliano.culpo@googlemail.com> | 2017-10-27 08:16:04 +0200 |
| commit | 1de2109a5ad69b09f8d173753e392a9a4e00c0db (patch) | |
| tree | d32867c4cb88432abcf4b8c6434d59821a063684 /var | |
| parent | 82b1731dedd0cefbe6650382ffc61b9f36ef3b22 (diff) | |
| download | spack-1de2109a5ad69b09f8d173753e392a9a4e00c0db.tar.gz spack-1de2109a5ad69b09f8d173753e392a9a4e00c0db.tar.bz2 spack-1de2109a5ad69b09f8d173753e392a9a4e00c0db.tar.xz spack-1de2109a5ad69b09f8d173753e392a9a4e00c0db.zip | |
r-agdex: Create new package. (#5983)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-agdex/package.py | 39 |
1 files changed, 39 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-agdex/package.py b/var/spack/repos/builtin/packages/r-agdex/package.py new file mode 100644 index 0000000000..3d7b36e044 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-agdex/package.py @@ -0,0 +1,39 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RAgdex(RPackage): + """A tool to evaluate agreement of differential expression + for cross-species genomics.""" + + homepage = "http://bioconductor.org/packages/AGDEX/" + url = "https://git.bioconductor.org/packages/AGDEX" + + version('1.24.0', git='https://git.bioconductor.org/packages/AGDEX', commit='29c6bcfa6919a5c6d8bcb36b44e75145a60ce7b5') + + depends_on('r@3.4.0:3.4.9', when='@1.24.0') + depends_on('r-biobase', type=('build', 'run')) + depends_on('r-gseabase', type=('build', 'run')) |