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| author | lingnanyuan <1297162327@qq.com> | 2017-09-25 17:57:17 -0500 |
|---|---|---|
| committer | Christoph Junghans <christoph.junghans@gmail.com> | 2017-09-25 16:57:17 -0600 |
| commit | 34d41312847f2460cd61d1dec2fd776404ec3944 (patch) | |
| tree | 0a54bc5c5e24c3f1f5fc868addf7c9ab2f12ddc6 /var | |
| parent | 111c216fb74d8cbc78cfe3a68eff51d48f21e4db (diff) | |
| download | spack-34d41312847f2460cd61d1dec2fd776404ec3944.tar.gz spack-34d41312847f2460cd61d1dec2fd776404ec3944.tar.bz2 spack-34d41312847f2460cd61d1dec2fd776404ec3944.tar.xz spack-34d41312847f2460cd61d1dec2fd776404ec3944.zip | |
r-genefilter: New package. (#5467)
* r-genefilter: Create New Package.
* r-genefilter: Create new package.
* r-genefilter: Correct format.
* Update package.py
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-genefilter/package.py | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-genefilter/package.py b/var/spack/repos/builtin/packages/r-genefilter/package.py new file mode 100644 index 0000000000..1d2e4fa4b2 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-genefilter/package.py @@ -0,0 +1,38 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RGenefilter(RPackage): + """Some basic functions for filtering genes""" + + homepage = "https://bioconductor.org/packages/genefilter/" + url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/genefilter_1.58.1.tar.gz" + list_url = homepage + version('1.58.1', 'bc1a90bdf93d8db994220545cd80f438') + depends_on('r-s4vectors', type=('build', 'run')) + depends_on('r-annotationdbi', type=('build', 'run')) + depends_on('r-annotate', type=('build', 'run')) + depends_on('r-biobase', type=('build', 'run')) |