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| author | Yifan Zhu <ifanzhu@foxmail.com> | 2017-09-23 09:58:06 -0500 |
|---|---|---|
| committer | Christoph Junghans <christoph.junghans@gmail.com> | 2017-09-23 14:58:06 +0000 |
| commit | 6134e94edeb0cae1f969c6515989b1509211f414 (patch) | |
| tree | 72049e213bb72ddcc41f000ab0574a6c9a0c8f20 /var | |
| parent | d2c65247b069dca9a7530a41f3761fd3c1c3d096 (diff) | |
| download | spack-6134e94edeb0cae1f969c6515989b1509211f414.tar.gz spack-6134e94edeb0cae1f969c6515989b1509211f414.tar.bz2 spack-6134e94edeb0cae1f969c6515989b1509211f414.tar.xz spack-6134e94edeb0cae1f969c6515989b1509211f414.zip | |
r-affyio: created new package (#5433)
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/r-affyio/package.py | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-affyio/package.py b/var/spack/repos/builtin/packages/r-affyio/package.py new file mode 100644 index 0000000000..91bd3ddb03 --- /dev/null +++ b/var/spack/repos/builtin/packages/r-affyio/package.py @@ -0,0 +1,37 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class RAffyio(RPackage): + """Routines for parsing Affymetrix data files based upon file format + information. Primary focus is on accessing the CEL and CDF file + formats.""" + + homepage = "https://bioconductor.org/packages/affyio/" + url = "https://bioconductor.org/packages/3.5/bioc/src/contrib/affyio_1.46.0.tar.gz" + + version('1.46.0', 'e1f7a89ae16940aa29b998a4dbdc0ef9') + depends_on('r-zlibbioc', type=('build', 'run')) |