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authorHarmen Stoppels <harmenstoppels@gmail.com>2020-08-01 01:01:39 +0200
committerGitHub <noreply@github.com>2020-07-31 18:01:39 -0500
commitd4831181eaa27576fa48e315a4621d69f1e8e99f (patch)
tree429340dbfe75a371375369a525ebab6257f7e9c5 /var
parent346977f5017b08149f99c89eb00e0708dc96fd98 (diff)
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Add libxc 5.0.0 (#17807)
With experimental CUDA support and some patches to make it compile. Currently +shared and +cuda conflict, this has to be fixed upstream.
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/libxc/0001-Bugfix-avoid-implicit-pointer-cast-to-make-libxc-com.patch26
-rw-r--r--var/spack/repos/builtin/packages/libxc/0002-Mark-xc_erfcx-a-GPU_FUNCTION.patch33
-rw-r--r--var/spack/repos/builtin/packages/libxc/package.py32
3 files changed, 88 insertions, 3 deletions
diff --git a/var/spack/repos/builtin/packages/libxc/0001-Bugfix-avoid-implicit-pointer-cast-to-make-libxc-com.patch b/var/spack/repos/builtin/packages/libxc/0001-Bugfix-avoid-implicit-pointer-cast-to-make-libxc-com.patch
new file mode 100644
index 0000000000..366f680168
--- /dev/null
+++ b/var/spack/repos/builtin/packages/libxc/0001-Bugfix-avoid-implicit-pointer-cast-to-make-libxc-com.patch
@@ -0,0 +1,26 @@
+From 205a08a30ee0d057d173f9eaa6fc6414f6960c22 Mon Sep 17 00:00:00 2001
+From: Xavier Andrade <xavier@tddft.org>
+Date: Wed, 27 May 2020 15:42:32 -0700
+Subject: [PATCH] Bugfix: avoid implicit pointer cast to make libxc compile
+ with a C++ compiler.
+
+---
+ src/functionals.c | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/src/functionals.c b/src/functionals.c
+index 3f668292..293f7f9b 100644
+--- a/src/functionals.c
++++ b/src/functionals.c
+@@ -324,7 +324,7 @@ xc_func_set_ext_params_name(xc_func_type *p, const char *name, double par)
+
+ assert(p != NULL && p->info->ext_params.n > 0);
+
+- ext_params = libxc_malloc(p->info->ext_params.n*sizeof(double));
++ ext_params = (double *) libxc_malloc(p->info->ext_params.n*sizeof(double));
+ for(ii=0; ii<p->info->ext_params.n; ii++){
+ if(strcmp(p->info->ext_params.names[ii], name) == 0)
+ ext_params[ii] = par;
+--
+2.25.1
+
diff --git a/var/spack/repos/builtin/packages/libxc/0002-Mark-xc_erfcx-a-GPU_FUNCTION.patch b/var/spack/repos/builtin/packages/libxc/0002-Mark-xc_erfcx-a-GPU_FUNCTION.patch
new file mode 100644
index 0000000000..a4e4f104a3
--- /dev/null
+++ b/var/spack/repos/builtin/packages/libxc/0002-Mark-xc_erfcx-a-GPU_FUNCTION.patch
@@ -0,0 +1,33 @@
+From 11b90a0a477925f19dfeb7e1f672058f25d83387 Mon Sep 17 00:00:00 2001
+From: Harmen Stoppels <harmenstoppels@gmail.com>
+Date: Fri, 31 Jul 2020 13:54:39 +0200
+Subject: [PATCH] Mark xc_erfcx a GPU_FUNCTION
+
+---
+ src/faddeeva.c | 3 +++
+ 1 file changed, 3 insertions(+)
+
+diff --git a/src/faddeeva.c b/src/faddeeva.c
+index ceec4736..03484713 100644
+--- a/src/faddeeva.c
++++ b/src/faddeeva.c
+@@ -29,6 +29,8 @@
+
+ #include "config.h"
+
++#include "util.h"
++
+ #include <math.h>
+
+ /* erfcx(x) = exp(x^2) erfc(x) function, for real x, written by
+@@ -477,6 +479,7 @@ return 0.97771701335885035464e0 + (0.22000938572830479551e-1 + (0.27951610702682
+ return 1.0;
+ }
+
++GPU_FUNCTION
+ double xc_erfcx(double x)
+ {
+ if (x >= 0) {
+--
+2.25.1
+
diff --git a/var/spack/repos/builtin/packages/libxc/package.py b/var/spack/repos/builtin/packages/libxc/package.py
index 6b45e7f2bb..61597ebaa0 100644
--- a/var/spack/repos/builtin/packages/libxc/package.py
+++ b/var/spack/repos/builtin/packages/libxc/package.py
@@ -6,13 +6,14 @@
from spack import *
-class Libxc(AutotoolsPackage):
+class Libxc(AutotoolsPackage, CudaPackage):
"""Libxc is a library of exchange-correlation functionals for
density-functional theory."""
homepage = "https://tddft.org/programs/libxc/"
url = "https://www.tddft.org/programs/libxc/down.php?file=2.2.2/libxc-2.2.2.tar.gz"
+ version('5.0.0', sha256='1cdc57930f7b57da4eb9b2c55a50ba1c2c385936ddaf5582fee830994461a892')
version('4.3.4', sha256='a8ee37ddc5079339854bd313272856c9d41a27802472ee9ae44b58ee9a298337')
version('4.3.2', sha256='bc159aea2537521998c7fb1199789e1be71e04c4b7758d58282622e347603a6f')
version('4.2.3', sha256='02e49e9ba7d21d18df17e9e57eae861e6ce05e65e966e1e832475aa09e344256')
@@ -20,6 +21,14 @@ class Libxc(AutotoolsPackage):
version('2.2.2', sha256='6ca1d0bb5fdc341d59960707bc67f23ad54de8a6018e19e02eee2b16ea7cc642')
version('2.2.1', sha256='ade61c1fa4ed238edd56408fd8ee6c2e305a3d5753e160017e2a71817c98fd00')
+ variant('shared', default=True, description='Build shared libraries')
+
+ conflicts('+shared +cuda', msg='Only ~shared supported with +cuda')
+ conflicts('+cuda', when='@:4', msg='CUDA support only in libxc 5.0.0 and above')
+
+ patch('0001-Bugfix-avoid-implicit-pointer-cast-to-make-libxc-com.patch', when='@5.0.0')
+ patch('0002-Mark-xc_erfcx-a-GPU_FUNCTION.patch', when='@5.0.0')
+
@property
def libs(self):
"""Libxc can be queried for the following parameters:
@@ -36,7 +45,8 @@ class Libxc(AutotoolsPackage):
# Libxc installs both shared and static libraries.
# If a client ask for static explicitly then return
# the static libraries
- shared = ('static' not in query_parameters)
+ shared = (self.spec.variants['shared'].value and
+ 'static' not in query_parameters)
# Libxc has a fortran90 interface: give clients the
# possibility to query for it
@@ -82,8 +92,24 @@ class Libxc(AutotoolsPackage):
env.append_flags('CFLAGS', optflags)
env.append_flags('FCFLAGS', optflags)
+ if '+cuda' in self.spec:
+ nvcc = self.spec['cuda'].prefix.bin.nvcc
+ env.set('CCLD', '{0} -ccbin {1}'.format(nvcc, spack_cc))
+ env.set('CC', '{0} -x cu -ccbin {1}'.format(nvcc, spack_cc))
+
+ cuda_arch = self.spec.variants['cuda_arch'].value[0]
+
+ if cuda_arch != 'none':
+ env.append_flags('CFLAGS', '-arch=sm_{0}'.format(cuda_arch))
+
def configure_args(self):
- args = ['--enable-shared']
+ spec = self.spec
+
+ args = [
+ '--enable-shared' if '+shared' in spec else '--disable-shared',
+ '--enable-cuda' if '+cuda' in spec else '--disable-cuda'
+ ]
+
return args
def check(self):