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authorAudrey Thoma <las_thoma15@iastate.edu>2017-08-17 07:49:57 -0500
committerAdam J. Stewart <ajstewart426@gmail.com>2017-08-17 07:49:57 -0500
commit3bb7767839290a7cab2554c14c3bd22b37a435f6 (patch)
tree4e27f11360c7ca529faa935504330ee6d49eb35b /var
parentd65d1269b925ae5bb8bcfa7cf8acedb28b95cd51 (diff)
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py-faststructure: new package (#5131)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/py-faststructure/package.py39
1 files changed, 39 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-faststructure/package.py b/var/spack/repos/builtin/packages/py-faststructure/package.py
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+++ b/var/spack/repos/builtin/packages/py-faststructure/package.py
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+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class PyFaststructure(PythonPackage):
+ """FastStructure is a fast algorithm for inferring population structure
+ from large SNP genotype data."""
+
+ homepage = "https://github.com/rajanil/fastStructure"
+ url = "https://github.com/rajanil/fastStructure/archive/v1.0.tar.gz"
+
+ version('1.0', '5cbb76e7d49e27a57046ab641b666f97')
+
+ depends_on('py-cython', type='build')
+ depends_on('py-numpy', type=('build', 'run'))
+ depends_on('gsl')