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authorYifan Zhu <ifanzhu@foxmail.com>2017-10-06 21:13:09 -0500
committerChristoph Junghans <christoph.junghans@gmail.com>2017-10-06 20:13:09 -0600
commitcf94e4140b8079f5f8e697faa4233331f655fe26 (patch)
tree3e59df59cbf9511e05082030521c5c2778852f19 /var
parent62538e3d37d98d40f6197557ff86ec571827a802 (diff)
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r-genomeinfodbdata: created new package (#5639)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py35
1 files changed, 35 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
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+++ b/var/spack/repos/builtin/packages/r-genomeinfodbdata/package.py
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+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RGenomeinfodbdata(RPackage):
+ """for mapping between NCBI taxonomy ID and species. Used by functions
+ in the GenomeInfoDb package."""
+
+ homepage = "http://www.example.co://bioconductor.org/packages/3.5/data/annotation/html/GenomeInfoDbData.html"
+ url = "https://bioconductor.org/packages/3.5/data/annotation/src/contrib/GenomeInfoDbData_0.99.0.tar.gz"
+
+ version('0.99.0', '85977b51061dd02a90153db887040d05')