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authorlingnanyuan <1297162327@qq.com>2017-10-27 01:34:16 -0500
committerMassimiliano Culpo <massimiliano.culpo@googlemail.com>2017-10-27 08:34:16 +0200
commitf24465349624fcd5d986b5d95587ea7164177485 (patch)
treed65e790016469dd17a8b729ee4200e4e27f05541 /var
parent715a67924504b21f67e749f5e88c7924c5e69044 (diff)
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r-category: Create new package. (#5959)
Diffstat (limited to 'var')
-rw-r--r--var/spack/repos/builtin/packages/r-category/package.py46
1 files changed, 46 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-category/package.py b/var/spack/repos/builtin/packages/r-category/package.py
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+++ b/var/spack/repos/builtin/packages/r-category/package.py
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+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RCategory(RPackage):
+ """A collection of tools for performing category analysis."""
+
+ homepage = "https://www.bioconductor.org/packages/Category/"
+ url = "https://git.bioconductor.org/packages/Category"
+
+ version('2.42.1', git='https://git.bioconductor.org/packages/Category', commit='382c817a2371671a72f8f949dfb4050361ebabcd')
+
+ depends_on('r@3.4.0:3.4.9', when='@2.42.1')
+ depends_on('r-biocgenerics', type=('build', 'run'))
+ depends_on('r-annotationdbi', type=('build', 'run'))
+ depends_on('r-biobase', type=('build', 'run'))
+ depends_on('r-matrix', type=('build', 'run'))
+ depends_on('r-graph', type=('build', 'run'))
+ depends_on('r-rbgl', type=('build', 'run'))
+ depends_on('r-gseabase', type=('build', 'run'))
+ depends_on('r-genefilter', type=('build', 'run'))
+ depends_on('r-annotate', type=('build', 'run'))
+ depends_on('r-dbi', type=('build', 'run'))