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authorlingnanyuan <1297162327@qq.com>2017-09-25 20:55:03 -0500
committerChristoph Junghans <christoph.junghans@gmail.com>2017-09-25 19:55:03 -0600
commitf3152a560036ce78047eab9323f79155b84d98cd (patch)
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parent9b2c9bb69908db014b6dfe4fa4114fbda0302e10 (diff)
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r-limma: new package. (#5468)
* r-limma: Create New Package. * pr-quantities: add version & py-numpy conflict (#5307) * r-limma: Create new package. * r-limma: Correct format. * Update package.py
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diff --git a/var/spack/repos/builtin/packages/r-limma/package.py b/var/spack/repos/builtin/packages/r-limma/package.py
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+##############################################################################
+# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the NOTICE and LICENSE files for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class RLimma(RPackage):
+ """Data analysis, linear models and differential expression
+ for microarray data."""
+
+ homepage = "https://www.bioconductor.org/packages/limma/"
+ url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/limma_3.32.6.tar.gz"
+ list_url = homepage
+ version('3.32.6', 'df5dc2b85189a24e939efa3a8e6abc41')