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-rwxr-xr-x.github/workflows/install_spack.sh23
-rw-r--r--.github/workflows/linux_build_tests.yaml3
-rw-r--r--.github/workflows/linux_unit_tests.yaml80
-rw-r--r--.github/workflows/macos_python.yml23
-rw-r--r--.github/workflows/macos_unit_tests.yaml3
-rw-r--r--.github/workflows/minimum_python_versions.yaml3
6 files changed, 118 insertions, 17 deletions
diff --git a/.github/workflows/install_spack.sh b/.github/workflows/install_spack.sh
index 5efae461a5..bc1c5f43ec 100755
--- a/.github/workflows/install_spack.sh
+++ b/.github/workflows/install_spack.sh
@@ -1,5 +1,20 @@
#!/usr/bin/env sh
-git clone https://github.com/spack/spack.git
-echo -e "config:\n build_jobs: 2" > spack/etc/spack/config.yaml
-. spack/share/spack/setup-env.sh
-spack compilers
+. share/spack/setup-env.sh
+echo -e "config:\n build_jobs: 2" > etc/spack/config.yaml
+spack config add "packages:all:target:[x86_64]"
+# TODO: remove this explicit setting once apple-clang detection is fixed
+cat <<EOF > etc/spack/compilers.yaml
+compilers:
+- compiler:
+ spec: apple-clang@11.0.3
+ paths:
+ cc: /usr/bin/clang
+ cxx: /usr/bin/clang++
+ f77: /usr/local/bin/gfortran-9
+ fc: /usr/local/bin/gfortran-9
+ modules: []
+ operating_system: catalina
+ target: x86_64
+EOF
+spack compiler info apple-clang
+spack debug report
diff --git a/.github/workflows/linux_build_tests.yaml b/.github/workflows/linux_build_tests.yaml
index ecdf38bfe4..3f5c575df3 100644
--- a/.github/workflows/linux_build_tests.yaml
+++ b/.github/workflows/linux_build_tests.yaml
@@ -3,13 +3,12 @@ name: linux builds
on:
push:
branches:
- - master
- develop
- releases/**
pull_request:
branches:
- - master
- develop
+ - releases/**
paths-ignore:
# Don't run if we only modified packages in the built-in repository
- 'var/spack/repos/builtin/**'
diff --git a/.github/workflows/linux_unit_tests.yaml b/.github/workflows/linux_unit_tests.yaml
index 3130bfa36e..78fd0e8ce0 100644
--- a/.github/workflows/linux_unit_tests.yaml
+++ b/.github/workflows/linux_unit_tests.yaml
@@ -60,3 +60,83 @@ jobs:
uses: codecov/codecov-action@v1
with:
flags: unittests,linux
+ flake8:
+ runs-on: ubuntu-latest
+ steps:
+ - uses: actions/checkout@v2
+ - uses: actions/setup-python@v2
+ with:
+ python-version: 3.8
+ - name: Install Python packages
+ run: |
+ pip install --upgrade pip six setuptools flake8
+ - name: Setup git configuration
+ run: |
+ # Need this for the git tests to succeed.
+ git --version
+ git config --global user.email "spack@example.com"
+ git config --global user.name "Test User"
+ git fetch -u origin develop:develop
+ - name: Run flake8 tests
+ run: |
+ share/spack/qa/run-flake8-tests
+ shell:
+ runs-on: ubuntu-latest
+ steps:
+ - uses: actions/checkout@v2
+ - uses: actions/setup-python@v2
+ with:
+ python-version: 3.8
+ - name: Install System packages
+ run: |
+ sudo apt-get -y update
+ sudo apt-get install -y coreutils gfortran gnupg2 mercurial ninja-build patchelf zsh fish
+ # Needed for kcov
+ sudo apt-get -y install cmake binutils-dev libcurl4-openssl-dev zlib1g-dev libdw-dev libiberty-dev
+ - name: Install Python packages
+ run: |
+ pip install --upgrade pip six setuptools codecov coverage
+ - name: Setup git configuration
+ run: |
+ # Need this for the git tests to succeed.
+ git --version
+ git config --global user.email "spack@example.com"
+ git config --global user.name "Test User"
+ git fetch -u origin develop:develop
+ - name: Install kcov for bash script coverage
+ env:
+ KCOV_VERSION: 38
+ run: |
+ KCOV_ROOT=$(mktemp -d)
+ wget --output-document=${KCOV_ROOT}/${KCOV_VERSION}.tar.gz https://github.com/SimonKagstrom/kcov/archive/v${KCOV_VERSION}.tar.gz
+ tar -C ${KCOV_ROOT} -xzvf ${KCOV_ROOT}/${KCOV_VERSION}.tar.gz
+ mkdir -p ${KCOV_ROOT}/build
+ cd ${KCOV_ROOT}/build && cmake -Wno-dev ${KCOV_ROOT}/kcov-${KCOV_VERSION} && cd -
+ make -C ${KCOV_ROOT}/build && sudo make -C ${KCOV_ROOT}/build install
+ - name: Run shell tests
+ env:
+ COVERAGE: true
+ run: |
+ share/spack/qa/run-shell-tests
+ - name: Upload to codecov.io
+ uses: codecov/codecov-action@v1
+ with:
+ flags: shelltests,linux
+ documentation:
+ runs-on: ubuntu-latest
+ steps:
+ - uses: actions/checkout@v2
+ - uses: actions/setup-python@v2
+ with:
+ python-version: 3.8
+ - name: Install System packages
+ run: |
+ sudo apt-get -y update
+ sudo apt-get install -y coreutils ninja-build graphviz
+ - name: Install Python packages
+ run: |
+ pip install --upgrade pip six setuptools
+ pip install --upgrade -r lib/spack/docs/requirements.txt
+ - name: Build documentation
+ run: |
+ share/spack/qa/run-doc-tests
diff --git a/.github/workflows/macos_python.yml b/.github/workflows/macos_python.yml
index e136102a46..6134ef4cf2 100644
--- a/.github/workflows/macos_python.yml
+++ b/.github/workflows/macos_python.yml
@@ -8,6 +8,13 @@ on:
schedule:
# nightly at 1 AM
- cron: '0 1 * * *'
+ pull_request:
+ branches:
+ - develop
+ paths:
+ # Run if we modify this yaml file
+ - '.github/workflows/macos_python.yml'
+ # TODO: run if we touch any of the recipes involved in this
# GitHub Action Limits
# https://help.github.com/en/actions/reference/workflow-syntax-for-github-actions
@@ -21,7 +28,8 @@ jobs:
- name: spack install
run: |
. .github/workflows/install_spack.sh
- spack install -v gcc
+ # 9.2.0 is the latest version on which we apply homebrew patch
+ spack install -v --fail-fast gcc@9.2.0 %apple-clang
install_jupyter_clang:
name: jupyter
@@ -32,7 +40,8 @@ jobs:
- name: spack install
run: |
. .github/workflows/install_spack.sh
- spack install -v py-jupyter %clang
+ spack config add packages:opengl:paths:opengl@4.1:/usr/X11R6
+ spack install -v --fail-fast py-jupyter %apple-clang
install_scipy_clang:
name: scipy, mpl, pd
@@ -42,9 +51,9 @@ jobs:
- name: spack install
run: |
. .github/workflows/install_spack.sh
- spack install -v py-scipy %clang
- spack install -v py-matplotlib %clang
- spack install -v py-pandas %clang
+ spack install -v --fail-fast py-scipy %apple-clang
+ spack install -v --fail-fast py-matplotlib %apple-clang
+ spack install -v --fail-fast py-pandas %apple-clang
install_mpi4py_clang:
name: mpi4py, petsc4py
@@ -54,5 +63,5 @@ jobs:
- name: spack install
run: |
. .github/workflows/install_spack.sh
- spack install -v py-mpi4py %clang
- spack install -v py-petsc4py %clang
+ spack install -v --fail-fast py-mpi4py %apple-clang
+ spack install -v --fail-fast py-petsc4py %apple-clang
diff --git a/.github/workflows/macos_unit_tests.yaml b/.github/workflows/macos_unit_tests.yaml
index 38feb2fc6a..f1e856070c 100644
--- a/.github/workflows/macos_unit_tests.yaml
+++ b/.github/workflows/macos_unit_tests.yaml
@@ -3,13 +3,12 @@ name: macos tests
on:
push:
branches:
- - master
- develop
- releases/**
pull_request:
branches:
- - master
- develop
+ - releases/**
jobs:
build:
diff --git a/.github/workflows/minimum_python_versions.yaml b/.github/workflows/minimum_python_versions.yaml
index 474f091514..a6ab5dfa40 100644
--- a/.github/workflows/minimum_python_versions.yaml
+++ b/.github/workflows/minimum_python_versions.yaml
@@ -3,13 +3,12 @@ name: python version check
on:
push:
branches:
- - master
- develop
- releases/**
pull_request:
branches:
- - master
- develop
+ - releases/**
jobs:
validate:
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-08-25 20:49:00 +0000