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-rw-r--r--lib/spack/spack/fetch_strategy.py240
-rw-r--r--lib/spack/spack/spec.py5
-rw-r--r--lib/spack/spack/util/executable.py92
-rw-r--r--var/spack/repos/builtin/packages/doxygen/package.py16
-rw-r--r--var/spack/repos/builtin/packages/flex/package.py5
-rw-r--r--var/spack/repos/builtin/packages/gcc/package.py91
-rw-r--r--var/spack/repos/builtin/packages/ghostscript/package.py6
-rw-r--r--var/spack/repos/builtin/packages/go-bootstrap/package.py51
-rw-r--r--var/spack/repos/builtin/packages/go/package.py80
-rw-r--r--var/spack/repos/builtin/packages/graphviz/package.py14
-rw-r--r--var/spack/repos/builtin/packages/hub/package.py24
-rw-r--r--var/spack/repos/builtin/packages/netcdf-cxx4/package.py9
-rw-r--r--var/spack/repos/builtin/packages/sed/package.py39
-rw-r--r--var/spack/repos/builtin/packages/the_platinum_searcher/package.py21
-rw-r--r--var/spack/repos/builtin/packages/turbomole/package.py76
15 files changed, 549 insertions, 220 deletions
diff --git a/lib/spack/spack/fetch_strategy.py b/lib/spack/spack/fetch_strategy.py
index e05cb13c1e..7c8cebe0c9 100644
--- a/lib/spack/spack/fetch_strategy.py
+++ b/lib/spack/spack/fetch_strategy.py
@@ -57,7 +57,6 @@ from spack.version import Version, ver
from spack.util.compression import decompressor_for, extension
import spack.util.pattern as pattern
-
"""List of all fetch strategies, created by FetchStrategy metaclass."""
all_strategies = []
@@ -82,13 +81,16 @@ class FetchStrategy(object):
class __metaclass__(type):
"""This metaclass registers all fetch strategies in a list."""
+
def __init__(cls, name, bases, dict):
type.__init__(cls, name, bases, dict)
- if cls.enabled: all_strategies.append(cls)
+ if cls.enabled:
+ all_strategies.append(cls)
def __init__(self):
- # The stage is initialized late, so that fetch strategies can be constructed
- # at package construction time. This is where things will be fetched.
+ # The stage is initialized late, so that fetch strategies can be
+ # constructed at package construction time. This is where things
+ # will be fetched.
self.stage = None
def set_stage(self, stage):
@@ -97,15 +99,20 @@ class FetchStrategy(object):
self.stage = stage
# Subclasses need to implement these methods
- def fetch(self): pass # Return True on success, False on fail.
+ def fetch(self):
+ pass # Return True on success, False on fail.
- def check(self): pass # Do checksum.
+ def check(self):
+ pass # Do checksum.
- def expand(self): pass # Expand archive.
+ def expand(self):
+ pass # Expand archive.
- def reset(self): pass # Revert to freshly downloaded state.
+ def reset(self):
+ pass # Revert to freshly downloaded state.
- def archive(self, destination): pass # Used to create tarball for mirror.
+ def archive(self, destination):
+ pass # Used to create tarball for mirror.
def __str__(self): # Should be human readable URL.
return "FetchStrategy.__str___"
@@ -139,10 +146,12 @@ class URLFetchStrategy(FetchStrategy):
# If URL or digest are provided in the kwargs, then prefer
# those values.
self.url = kwargs.get('url', None)
- if not self.url: self.url = url
+ if not self.url:
+ self.url = url
self.digest = kwargs.get('md5', None)
- if not self.digest: self.digest = digest
+ if not self.digest:
+ self.digest = digest
self.expand_archive = kwargs.get('expand', True)
@@ -167,16 +176,20 @@ class URLFetchStrategy(FetchStrategy):
tty.msg("Trying to fetch from %s" % self.url)
if partial_file:
- save_args = ['-C', '-', # continue partial downloads
- '-o', partial_file] # use a .part file
+ save_args = ['-C',
+ '-', # continue partial downloads
+ '-o',
+ partial_file] # use a .part file
else:
save_args = ['-O']
curl_args = save_args + [
- '-f', # fail on >400 errors
- '-D', '-', # print out HTML headers
- '-L', # resolve 3xx redirects
- self.url, ]
+ '-f', # fail on >400 errors
+ '-D',
+ '-', # print out HTML headers
+ '-L', # resolve 3xx redirects
+ self.url,
+ ]
if sys.stdout.isatty():
curl_args.append('-#') # status bar when using a tty
@@ -184,8 +197,7 @@ class URLFetchStrategy(FetchStrategy):
curl_args.append('-sS') # just errors when not.
# Run curl but grab the mime type from the http headers
- headers = spack.curl(
- *curl_args, output=str, fail_on_error=False)
+ headers = spack.curl(*curl_args, output=str, fail_on_error=False)
if spack.curl.returncode != 0:
# clean up archive on failure.
@@ -198,33 +210,36 @@ class URLFetchStrategy(FetchStrategy):
if spack.curl.returncode == 22:
# This is a 404. Curl will print the error.
raise FailedDownloadError(
- self.url, "URL %s was not found!" % self.url)
+ self.url, "URL %s was not found!" % self.url)
elif spack.curl.returncode == 60:
# This is a certificate error. Suggest spack -k
raise FailedDownloadError(
- self.url,
- "Curl was unable to fetch due to invalid certificate. "
- "This is either an attack, or your cluster's SSL configuration "
- "is bad. If you believe your SSL configuration is bad, you "
- "can try running spack -k, which will not check SSL certificates."
- "Use this at your own risk.")
+ self.url,
+ "Curl was unable to fetch due to invalid certificate. "
+ "This is either an attack, or your cluster's SSL "
+ "configuration is bad. If you believe your SSL "
+ "configuration is bad, you can try running spack -k, "
+ "which will not check SSL certificates."
+ "Use this at your own risk.")
else:
# This is some other curl error. Curl will print the
# error, but print a spack message too
raise FailedDownloadError(
- self.url, "Curl failed with error %d" % spack.curl.returncode)
+ self.url,
+ "Curl failed with error %d" % spack.curl.returncode)
# Check if we somehow got an HTML file rather than the archive we
# asked for. We only look at the last content type, to handle
# redirects properly.
content_types = re.findall(r'Content-Type:[^\r\n]+', headers)
if content_types and 'text/html' in content_types[-1]:
- tty.warn("The contents of " + self.archive_file + " look like HTML.",
- "The checksum will likely be bad. If it is, you can use",
- "'spack clean <package>' to remove the bad archive, then fix",
- "your internet gateway issue and install again.")
+ tty.warn(
+ "The contents of " + self.archive_file + " look like HTML.",
+ "The checksum will likely be bad. If it is, you can use",
+ "'spack clean <package>' to remove the bad archive, then fix",
+ "your internet gateway issue and install again.")
if save_file:
os.rename(partial_file, save_file)
@@ -247,14 +262,16 @@ class URLFetchStrategy(FetchStrategy):
self.stage.chdir()
if not self.archive_file:
- raise NoArchiveFileError("URLFetchStrategy couldn't find archive file",
- "Failed on expand() for URL %s" % self.url)
+ raise NoArchiveFileError(
+ "URLFetchStrategy couldn't find archive file",
+ "Failed on expand() for URL %s" % self.url)
decompress = decompressor_for(self.archive_file)
# Expand all tarballs in their own directory to contain
# exploding tarballs.
- tarball_container = os.path.join(self.stage.path, "spack-expanded-archive")
+ tarball_container = os.path.join(self.stage.path,
+ "spack-expanded-archive")
mkdirp(tarball_container)
os.chdir(tarball_container)
decompress(self.archive_file)
@@ -295,20 +312,25 @@ class URLFetchStrategy(FetchStrategy):
"""Check the downloaded archive against a checksum digest.
No-op if this stage checks code out of a repository."""
if not self.digest:
- raise NoDigestError("Attempt to check URLFetchStrategy with no digest.")
+ raise NoDigestError(
+ "Attempt to check URLFetchStrategy with no digest.")
checker = crypto.Checker(self.digest)
if not checker.check(self.archive_file):
raise ChecksumError(
- "%s checksum failed for %s" % (checker.hash_name, self.archive_file),
- "Expected %s but got %s" % (self.digest, checker.sum))
+ "%s checksum failed for %s" %
+ (checker.hash_name, self.archive_file),
+ "Expected %s but got %s" % (self.digest, checker.sum))
@_needs_stage
def reset(self):
- """Removes the source path if it exists, then re-expands the archive."""
+ """
+ Removes the source path if it exists, then re-expands the archive.
+ """
if not self.archive_file:
- raise NoArchiveFileError("Tried to reset URLFetchStrategy before fetching",
- "Failed on reset() for URL %s" % self.url)
+ raise NoArchiveFileError(
+ "Tried to reset URLFetchStrategy before fetching",
+ "Failed on reset() for URL %s" % self.url)
# Remove everythigng but the archive from the stage
for filename in os.listdir(self.stage.path):
@@ -337,14 +359,16 @@ class VCSFetchStrategy(FetchStrategy):
# Set a URL based on the type of fetch strategy.
self.url = kwargs.get(name, None)
- if not self.url: raise ValueError(
+ if not self.url:
+ raise ValueError(
"%s requires %s argument." % (self.__class__, name))
# Ensure that there's only one of the rev_types
if sum(k in kwargs for k in rev_types) > 1:
raise FetchStrategyError(
- "Supply only one of %s to fetch with %s" % (
- comma_or(rev_types), name))
+ "Supply only one of %s to fetch with %s" % (
+ comma_or(rev_types), name
+ ))
# Set attributes for each rev type.
for rt in rev_types:
@@ -382,32 +406,93 @@ class VCSFetchStrategy(FetchStrategy):
return "%s<%s>" % (self.__class__, self.url)
+class GoFetchStrategy(VCSFetchStrategy):
+ """
+ Fetch strategy that employs the `go get` infrastructure
+ Use like this in a package:
+
+ version('name',
+ go='github.com/monochromegane/the_platinum_searcher/...')
+
+ Go get does not natively support versions, they can be faked with git
+ """
+ enabled = True
+ required_attributes = ('go', )
+
+ def __init__(self, **kwargs):
+ # Discards the keywords in kwargs that may conflict with the next
+ # call to __init__
+ forwarded_args = copy.copy(kwargs)
+ forwarded_args.pop('name', None)
+
+ super(GoFetchStrategy, self).__init__('go', **forwarded_args)
+ self._go = None
+
+ @property
+ def go_version(self):
+ vstring = self.go('version', output=str).split(' ')[2]
+ return Version(vstring)
+
+ @property
+ def go(self):
+ if not self._go:
+ self._go = which('go', required=True)
+ return self._go
+
+ @_needs_stage
+ def fetch(self):
+ self.stage.chdir()
+
+ tty.msg("Trying to get go resource:", self.url)
+
+ try:
+ os.mkdir('go')
+ except OSError:
+ pass
+ env = dict(os.environ)
+ env['GOPATH'] = os.path.join(os.getcwd(), 'go')
+ self.go('get', '-v', '-d', self.url, env=env)
+
+ def archive(self, destination):
+ super(GoFetchStrategy, self).archive(destination, exclude='.git')
+
+ @_needs_stage
+ def reset(self):
+ self.stage.chdir_to_source()
+ self.go('clean')
+
+ def __str__(self):
+ return "[go] %s" % self.url
+
+
class GitFetchStrategy(VCSFetchStrategy):
- """Fetch strategy that gets source code from a git repository.
- Use like this in a package:
+ """
+ Fetch strategy that gets source code from a git repository.
+ Use like this in a package:
- version('name', git='https://github.com/project/repo.git')
+ version('name', git='https://github.com/project/repo.git')
- Optionally, you can provide a branch, or commit to check out, e.g.:
+ Optionally, you can provide a branch, or commit to check out, e.g.:
- version('1.1', git='https://github.com/project/repo.git', tag='v1.1')
+ version('1.1', git='https://github.com/project/repo.git', tag='v1.1')
- You can use these three optional attributes in addition to ``git``:
+ You can use these three optional attributes in addition to ``git``:
- * ``branch``: Particular branch to build from (default is master)
- * ``tag``: Particular tag to check out
- * ``commit``: Particular commit hash in the repo
+ * ``branch``: Particular branch to build from (default is master)
+ * ``tag``: Particular tag to check out
+ * ``commit``: Particular commit hash in the repo
"""
enabled = True
- required_attributes = ('git',)
+ required_attributes = ('git', )
def __init__(self, **kwargs):
- # Discards the keywords in kwargs that may conflict with the next call to __init__
+ # Discards the keywords in kwargs that may conflict with the next call
+ # to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(GitFetchStrategy, self).__init__(
- 'git', 'tag', 'branch', 'commit', **forwarded_args)
+ 'git', 'tag', 'branch', 'commit', **forwarded_args)
self._git = None
@property
@@ -515,12 +600,13 @@ class SvnFetchStrategy(VCSFetchStrategy):
required_attributes = ['svn']
def __init__(self, **kwargs):
- # Discards the keywords in kwargs that may conflict with the next call to __init__
+ # Discards the keywords in kwargs that may conflict with the next call
+ # to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(SvnFetchStrategy, self).__init__(
- 'svn', 'revision', **forwarded_args)
+ 'svn', 'revision', **forwarded_args)
self._svn = None
if self.revision is not None:
self.revision = str(self.revision)
@@ -576,32 +662,35 @@ class SvnFetchStrategy(VCSFetchStrategy):
class HgFetchStrategy(VCSFetchStrategy):
- """Fetch strategy that gets source code from a Mercurial repository.
- Use like this in a package:
+ """
+ Fetch strategy that gets source code from a Mercurial repository.
+ Use like this in a package:
- version('name', hg='https://jay.grs.rwth-aachen.de/hg/lwm2')
+ version('name', hg='https://jay.grs.rwth-aachen.de/hg/lwm2')
- Optionally, you can provide a branch, or revision to check out, e.g.:
+ Optionally, you can provide a branch, or revision to check out, e.g.:
- version('torus', hg='https://jay.grs.rwth-aachen.de/hg/lwm2', branch='torus')
+ version('torus',
+ hg='https://jay.grs.rwth-aachen.de/hg/lwm2', branch='torus')
- You can use the optional 'revision' attribute to check out a
- branch, tag, or particular revision in hg. To prevent
- non-reproducible builds, using a moving target like a branch is
- discouraged.
+ You can use the optional 'revision' attribute to check out a
+ branch, tag, or particular revision in hg. To prevent
+ non-reproducible builds, using a moving target like a branch is
+ discouraged.
- * ``revision``: Particular revision, branch, or tag.
+ * ``revision``: Particular revision, branch, or tag.
"""
enabled = True
required_attributes = ['hg']
def __init__(self, **kwargs):
- # Discards the keywords in kwargs that may conflict with the next call to __init__
+ # Discards the keywords in kwargs that may conflict with the next call
+ # to __init__
forwarded_args = copy.copy(kwargs)
forwarded_args.pop('name', None)
super(HgFetchStrategy, self).__init__(
- 'hg', 'revision', **forwarded_args)
+ 'hg', 'revision', **forwarded_args)
self._hg = None
@property
@@ -675,7 +764,8 @@ def from_kwargs(**kwargs):
return fetcher(**kwargs)
# Raise an error in case we can't instantiate any known strategy
message = "Cannot instantiate any FetchStrategy"
- long_message = message + " from the given arguments : {arguments}".format(srguments=kwargs)
+ long_message = message + " from the given arguments : {arguments}".format(
+ srguments=kwargs)
raise FetchError(message, long_message)
@@ -687,7 +777,7 @@ def for_package_version(pkg, version):
"""Determine a fetch strategy based on the arguments supplied to
version() in the package description."""
# If it's not a known version, extrapolate one.
- if not version in pkg.versions:
+ if version not in pkg.versions:
url = pkg.url_for_version(version)
if not url:
raise InvalidArgsError(pkg, version)
@@ -725,7 +815,7 @@ class FailedDownloadError(FetchError):
def __init__(self, url, msg=""):
super(FailedDownloadError, self).__init__(
- "Failed to fetch file from URL: %s" % url, msg)
+ "Failed to fetch file from URL: %s" % url, msg)
self.url = url
@@ -741,7 +831,8 @@ class NoDigestError(FetchError):
class InvalidArgsError(FetchError):
def __init__(self, pkg, version):
- msg = "Could not construct a fetch strategy for package %s at version %s"
+ msg = ("Could not construct a fetch strategy for package %s at "
+ "version %s")
msg %= (pkg.name, version)
super(InvalidArgsError, self).__init__(msg)
@@ -758,4 +849,5 @@ class NoStageError(FetchError):
def __init__(self, method):
super(NoStageError, self).__init__(
- "Must call FetchStrategy.set_stage() before calling %s" % method.__name__)
+ "Must call FetchStrategy.set_stage() before calling %s" %
+ method.__name__)
diff --git a/lib/spack/spack/spec.py b/lib/spack/spack/spec.py
index 89a023a750..470353c4f6 100644
--- a/lib/spack/spack/spec.py
+++ b/lib/spack/spack/spec.py
@@ -1071,6 +1071,11 @@ class Spec(object):
# If there is a provider for the vpkg, then use that instead of
# the virtual package.
if providers:
+ # Remove duplicate providers that can concretize to the same result.
+ for provider in providers:
+ for spec in providers:
+ if spec is not provider and provider.satisfies(spec):
+ providers.remove(spec)
# Can't have multiple providers for the same thing in one spec.
if len(providers) > 1:
raise MultipleProviderError(vdep, providers)
diff --git a/lib/spack/spack/util/executable.py b/lib/spack/spack/util/executable.py
index d2ccfde69b..38b778fa00 100644
--- a/lib/spack/spack/util/executable.py
+++ b/lib/spack/spack/util/executable.py
@@ -22,10 +22,8 @@
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
-__all__ = ['Executable', 'which', 'ProcessError']
import os
-import sys
import re
import subprocess
import inspect
@@ -34,9 +32,12 @@ import llnl.util.tty as tty
import spack
import spack.error
+__all__ = ['Executable', 'which', 'ProcessError']
+
class Executable(object):
"""Class representing a program that can be run on the command line."""
+
def __init__(self, name):
self.exe = name.split(' ')
self.returncode = None
@@ -44,16 +45,13 @@ class Executable(object):
if not self.exe:
raise ProcessError("Cannot construct executable for '%s'" % name)
-
def add_default_arg(self, arg):
self.exe.append(arg)
-
@property
def command(self):
return ' '.join(self.exe)
-
def __call__(self, *args, **kwargs):
"""Run this executable in a subprocess.
@@ -105,6 +103,8 @@ class Executable(object):
fail_on_error = kwargs.pop("fail_on_error", True)
ignore_errors = kwargs.pop("ignore_errors", ())
+ env = kwargs.get('env', None)
+
# TODO: This is deprecated. Remove in a future version.
return_output = kwargs.pop("return_output", False)
@@ -114,8 +114,8 @@ class Executable(object):
else:
output = kwargs.pop("output", None)
- error = kwargs.pop("error", None)
- input = kwargs.pop("input", None)
+ error = kwargs.pop("error", None)
+ input = kwargs.pop("input", None)
if input is str:
raise ValueError("Cannot use `str` as input stream.")
@@ -126,85 +126,90 @@ class Executable(object):
return subprocess.PIPE, False
else:
return arg, False
+
ostream, close_ostream = streamify(output, 'w')
- estream, close_estream = streamify(error, 'w')
- istream, close_istream = streamify(input, 'r')
+ estream, close_estream = streamify(error, 'w')
+ istream, close_istream = streamify(input, 'r')
# if they just want to ignore one error code, make it a tuple.
if isinstance(ignore_errors, int):
- ignore_errors = (ignore_errors,)
+ ignore_errors = (ignore_errors, )
quoted_args = [arg for arg in args if re.search(r'^"|^\'|"$|\'$', arg)]
if quoted_args:
- tty.warn("Quotes in command arguments can confuse scripts like configure.",
- "The following arguments may cause problems when executed:",
- str("\n".join([" "+arg for arg in quoted_args])),
- "Quotes aren't needed because spack doesn't use a shell.",
- "Consider removing them")
+ tty.warn(
+ "Quotes in command arguments can confuse scripts like"
+ " configure.",
+ "The following arguments may cause problems when executed:",
+ str("\n".join([" " + arg for arg in quoted_args])),
+ "Quotes aren't needed because spack doesn't use a shell.",
+ "Consider removing them")
cmd = self.exe + list(args)
- cmd_line = "'%s'" % "' '".join(map(lambda arg: arg.replace("'", "'\"'\"'"), cmd))
+ cmd_line = "'%s'" % "' '".join(
+ map(lambda arg: arg.replace("'", "'\"'\"'"), cmd))
tty.debug(cmd_line)
try:
proc = subprocess.Popen(
- cmd, stdin=istream, stderr=estream, stdout=ostream)
+ cmd,
+ stdin=istream,
+ stderr=estream,
+ stdout=ostream,
+ env=env)
out, err = proc.communicate()
rc = self.returncode = proc.returncode
if fail_on_error and rc != 0 and (rc not in ignore_errors):
- raise ProcessError("Command exited with status %d:"
- % proc.returncode, cmd_line)
+ raise ProcessError("Command exited with status %d:" %
+ proc.returncode, cmd_line)
if output is str or error is str:
result = ''
- if output is str: result += out
- if error is str: result += err
+ if output is str:
+ result += out
+ if error is str:
+ result += err
return result
except OSError, e:
raise ProcessError(
- "%s: %s" % (self.exe[0], e.strerror),
- "Command: " + cmd_line)
+ "%s: %s" % (self.exe[0], e.strerror), "Command: " + cmd_line)
except subprocess.CalledProcessError, e:
if fail_on_error:
raise ProcessError(
- str(e),
- "\nExit status %d when invoking command: %s"
- % (proc.returncode, cmd_line))
+ str(e), "\nExit status %d when invoking command: %s" %
+ (proc.returncode, cmd_line))
finally:
- if close_ostream: output.close()
- if close_estream: error.close()
- if close_istream: input.close()
-
+ if close_ostream:
+ output.close()
+ if close_estream:
+ error.close()
+ if close_istream:
+ input.close()
def __eq__(self, other):
return self.exe == other.exe
-
def __neq__(self, other):
return not (self == other)
-
def __hash__(self):
- return hash((type(self),) + tuple(self.exe))
-
+ return hash((type(self), ) + tuple(self.exe))
def __repr__(self):
return "<exe: %s>" % self.exe
-
def __str__(self):
return ' '.join(self.exe)
-
def which(name, **kwargs):
"""Finds an executable in the path like command-line which."""
- path = kwargs.get('path', os.environ.get('PATH', '').split(os.pathsep))
+ path = kwargs.get('path', os.environ.get('PATH', '').split(os.pathsep))
required = kwargs.get('required', False)
if not path:
@@ -233,14 +238,16 @@ class ProcessError(spack.error.SpackError):
@property
def long_message(self):
msg = self._long_message
- if msg: msg += "\n\n"
+ if msg:
+ msg += "\n\n"
if self.build_log:
msg += "See build log for details:\n"
msg += " %s" % self.build_log
if self.package_context:
- if msg: msg += "\n\n"
+ if msg:
+ msg += "\n\n"
msg += '\n'.join(self.package_context)
return msg
@@ -267,7 +274,7 @@ def _get_package_context():
frame = f[0]
# Find a frame with 'self' in the local variables.
- if not 'self' in frame.f_locals:
+ if 'self' not in frame.f_locals:
continue
# Look only at a frame in a subclass of spack.Package
@@ -280,9 +287,8 @@ def _get_package_context():
# Build a message showing where in install we failed.
lines.append("%s:%d, in %s:" % (
- inspect.getfile(frame.f_code),
- frame.f_lineno,
- frame.f_code.co_name))
+ inspect.getfile(frame.f_code), frame.f_lineno, frame.f_code.co_name
+ ))
sourcelines, start = inspect.getsourcelines(frame)
for i, line in enumerate(sourcelines):
diff --git a/var/spack/repos/builtin/packages/doxygen/package.py b/var/spack/repos/builtin/packages/doxygen/package.py
index b8f15dee14..b2e9582b5a 100644
--- a/var/spack/repos/builtin/packages/doxygen/package.py
+++ b/var/spack/repos/builtin/packages/doxygen/package.py
@@ -22,12 +22,7 @@
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
-
-# Author: Justin Too <justin@doubleotoo.com>
-# Date: September 11, 2015
-
from spack import *
-import sys
class Doxygen(Package):
@@ -43,10 +38,15 @@ class Doxygen(Package):
version('1.8.11', 'f4697a444feaed739cfa2f0644abc19b')
version('1.8.10', '79767ccd986f12a0f949015efb5f058f')
+ # graphviz appears to be a run-time optional dependency
+ variant('graphviz', default=True, description='Build with dot command support from Graphviz.') # NOQA: ignore=E501
+
depends_on("cmake@2.8.12:")
- # flex does not build on OSX, but it's provided there anyway
- depends_on("flex", sys.platform != 'darwin')
- depends_on("bison", sys.platform != 'darwin')
+ depends_on("flex")
+ depends_on("bison")
+
+ # optional dependencies
+ depends_on("graphviz", when="+graphviz")
def install(self, spec, prefix):
cmake('.', *std_cmake_args)
diff --git a/var/spack/repos/builtin/packages/flex/package.py b/var/spack/repos/builtin/packages/flex/package.py
index 926651010f..b778538606 100644
--- a/var/spack/repos/builtin/packages/flex/package.py
+++ b/var/spack/repos/builtin/packages/flex/package.py
@@ -24,15 +24,18 @@
##############################################################################
from spack import *
+
class Flex(Package):
"""Flex is a tool for generating scanners."""
homepage = "http://flex.sourceforge.net/"
- url = "http://download.sourceforge.net/flex/flex-2.5.39.tar.gz"
+ url = "http://download.sourceforge.net/flex/flex-2.5.39.tar.gz"
version('2.6.0', '5724bcffed4ebe39e9b55a9be80859ec')
version('2.5.39', 'e133e9ead8ec0a58d81166b461244fde')
+ depends_on("bison")
+
def install(self, spec, prefix):
configure("--prefix=%s" % prefix)
diff --git a/var/spack/repos/builtin/packages/gcc/package.py b/var/spack/repos/builtin/packages/gcc/package.py
index 47dbeb2a99..224105ea0f 100644
--- a/var/spack/repos/builtin/packages/gcc/package.py
+++ b/var/spack/repos/builtin/packages/gcc/package.py
@@ -1,33 +1,9 @@
-##############################################################################
-# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
-# Produced at the Lawrence Livermore National Laboratory.
-#
-# This file is part of Spack.
-# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
-# LLNL-CODE-647188
-#
-# For details, see https://github.com/llnl/spack
-# Please also see the LICENSE file for our notice and the LGPL.
-#
-# This program is free software; you can redistribute it and/or modify
-# it under the terms of the GNU Lesser General Public License (as
-# published by the Free Software Foundation) version 2.1, February 1999.
-#
-# This program is distributed in the hope that it will be useful, but
-# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
-# conditions of the GNU Lesser General Public License for more details.
-#
-# You should have received a copy of the GNU Lesser General Public
-# License along with this program; if not, write to the Free Software
-# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
-##############################################################################
from spack import *
from contextlib import closing
from glob import glob
import sys
-import os
+
class Gcc(Package):
"""The GNU Compiler Collection includes front ends for C, C++,
@@ -50,10 +26,12 @@ class Gcc(Package):
version('4.6.4', 'b407a3d1480c11667f293bfb1f17d1a4')
version('4.5.4', '27e459c2566b8209ab064570e1b378f7')
- variant('binutils', default=sys.platform != 'darwin',
- description="Build via binutils")
- variant('gold', default=sys.platform != 'darwin',
- description="Build the gold linker plugin for ld-based LTO")
+ variant('binutils',
+ default=sys.platform != 'darwin',
+ description="Build via binutils")
+ variant('gold',
+ default=sys.platform != 'darwin',
+ description="Build the gold linker plugin for ld-based LTO")
depends_on("mpfr")
depends_on("gmp")
@@ -63,16 +41,18 @@ class Gcc(Package):
depends_on("binutils~libiberty+gold", when='+binutils +gold')
# TODO: integrate these libraries.
- #depends_on("ppl")
- #depends_on("cloog")
+ # depends_on("ppl")
+ # depends_on("cloog")
if sys.platform == 'darwin':
patch('darwin/gcc-4.9.patch1', when='@4.9.3')
patch('darwin/gcc-4.9.patch2', when='@4.9.3')
+ else:
+ provides('golang', when='@4.7.1:')
def install(self, spec, prefix):
# libjava/configure needs a minor fix to install into spack paths.
filter_file(r"'@.*@'", "'@[[:alnum:]]*@'", 'libjava/configure',
- string=True)
+ string=True)
enabled_languages = set(('c', 'c++', 'fortran', 'java', 'objc'))
@@ -80,62 +60,59 @@ class Gcc(Package):
enabled_languages.add('go')
# Generic options to compile GCC
- options = ["--prefix=%s" % prefix,
- "--libdir=%s/lib64" % prefix,
+ options = ["--prefix=%s" % prefix, "--libdir=%s/lib64" % prefix,
"--disable-multilib",
"--enable-languages=" + ','.join(enabled_languages),
- "--with-mpc=%s" % spec['mpc'].prefix,
- "--with-mpfr=%s" % spec['mpfr'].prefix,
- "--with-gmp=%s" % spec['gmp'].prefix,
- "--enable-lto",
- "--with-quad"]
+ "--with-mpc=%s" % spec['mpc'].prefix, "--with-mpfr=%s" %
+ spec['mpfr'].prefix, "--with-gmp=%s" % spec['gmp'].prefix,
+ "--enable-lto", "--with-quad"]
# Binutils
if spec.satisfies('+binutils'):
static_bootstrap_flags = "-static-libstdc++ -static-libgcc"
- binutils_options = ["--with-sysroot=/",
- "--with-stage1-ldflags=%s %s" %
- (self.rpath_args, static_bootstrap_flags),
- "--with-boot-ldflags=%s %s" %
- (self.rpath_args, static_bootstrap_flags),
- "--with-gnu-ld",
- "--with-ld=%s/bin/ld" % spec['binutils'].prefix,
- "--with-gnu-as",
- "--with-as=%s/bin/as" % spec['binutils'].prefix]
+ binutils_options = [
+ "--with-sysroot=/", "--with-stage1-ldflags=%s %s" %
+ (self.rpath_args, static_bootstrap_flags),
+ "--with-boot-ldflags=%s %s" %
+ (self.rpath_args, static_bootstrap_flags), "--with-gnu-ld",
+ "--with-ld=%s/bin/ld" % spec['binutils'].prefix,
+ "--with-gnu-as",
+ "--with-as=%s/bin/as" % spec['binutils'].prefix
+ ]
options.extend(binutils_options)
# Isl
if 'isl' in spec:
isl_options = ["--with-isl=%s" % spec['isl'].prefix]
options.extend(isl_options)
- if sys.platform == 'darwin' :
- darwin_options = [ "--with-build-config=bootstrap-debug" ]
+ if sys.platform == 'darwin':
+ darwin_options = ["--with-build-config=bootstrap-debug"]
options.extend(darwin_options)
build_dir = join_path(self.stage.path, 'spack-build')
- configure = Executable( join_path(self.stage.source_path, 'configure') )
+ configure = Executable(join_path(self.stage.source_path, 'configure'))
with working_dir(build_dir, create=True):
# Rest of install is straightforward.
configure(*options)
- if sys.platform == 'darwin' : make("bootstrap")
- else: make()
+ if sys.platform == 'darwin':
+ make("bootstrap")
+ else:
+ make()
make("install")
self.write_rpath_specs()
-
@property
def spec_dir(self):
# e.g. lib64/gcc/x86_64-unknown-linux-gnu/4.9.2
spec_dir = glob("%s/lib64/gcc/*/*" % self.prefix)
return spec_dir[0] if spec_dir else None
-
def write_rpath_specs(self):
"""Generate a spec file so the linker adds a rpath to the libs
the compiler used to build the executable."""
if not self.spec_dir:
tty.warn("Could not install specs for %s." %
- self.spec.format('$_$@'))
+ self.spec.format('$_$@'))
return
gcc = Executable(join_path(self.prefix.bin, 'gcc'))
@@ -146,5 +123,5 @@ class Gcc(Package):
out.write(line + "\n")
if line.startswith("*link:"):
out.write("-rpath %s/lib:%s/lib64 \\\n" %
- (self.prefix, self.prefix))
+ (self.prefix, self.prefix))
set_install_permissions(specs_file)
diff --git a/var/spack/repos/builtin/packages/ghostscript/package.py b/var/spack/repos/builtin/packages/ghostscript/package.py
index ba787f858f..707f65c902 100644
--- a/var/spack/repos/builtin/packages/ghostscript/package.py
+++ b/var/spack/repos/builtin/packages/ghostscript/package.py
@@ -24,18 +24,18 @@
##############################################################################
from spack import *
+
class Ghostscript(Package):
"""an interpreter for the PostScript language and for PDF. """
homepage = "http://ghostscript.com/"
- url = "http://downloads.ghostscript.com/public/ghostscript-9.16.tar.gz"
+ url = "http://downloads.ghostscript.com/public/old-gs-releases/ghostscript-9.16.tar.gz"
version('9.16', '829319325bbdb83f5c81379a8f86f38f')
parallel = False
def install(self, spec, prefix):
- configure("--prefix=%s" %prefix, "--enable-shared")
+ configure("--prefix=%s" % prefix, "--enable-shared")
make()
make("install")
-
diff --git a/var/spack/repos/builtin/packages/go-bootstrap/package.py b/var/spack/repos/builtin/packages/go-bootstrap/package.py
new file mode 100644
index 0000000000..b0e2109fd3
--- /dev/null
+++ b/var/spack/repos/builtin/packages/go-bootstrap/package.py
@@ -0,0 +1,51 @@
+import os
+import shutil
+import glob
+from spack import *
+
+# THIS PACKAGE SHOULD NOT EXIST
+# it exists to make up for the inability to:
+# * use an external go compiler
+# * have go depend on itself
+# * have a sensible way to find gccgo without a dep on gcc
+
+
+class GoBootstrap(Package):
+ """Old C-bootstrapped go to bootstrap real go"""
+ homepage = "https://golang.org"
+ url = "https://go.googlesource.com/go"
+
+ extendable = True
+
+ # temporary fix until tags are pulled correctly
+ version('1.4.2', git='https://go.googlesource.com/go', tag='go1.4.2')
+
+ variant('test',
+ default=True,
+ description="Run tests as part of build, a good idea but quite"
+ " time consuming")
+
+ provides('golang@:1.4.2')
+
+ depends_on('git')
+
+ def install(self, spec, prefix):
+ bash = which('bash')
+ with working_dir('src'):
+ if '+test' in spec:
+ bash('all.bash')
+ else:
+ bash('make.bash')
+
+ try:
+ os.makedirs(prefix)
+ except OSError:
+ pass
+ for f in glob.glob('*'):
+ if os.path.isdir(f):
+ shutil.copytree(f, os.path.join(prefix, f))
+ else:
+ shutil.copy2(f, os.path.join(prefix, f))
+
+ def setup_environment(self, spack_env, run_env):
+ spack_env.set('GOROOT_FINAL', self.spec.prefix)
diff --git a/var/spack/repos/builtin/packages/go/package.py b/var/spack/repos/builtin/packages/go/package.py
new file mode 100644
index 0000000000..13b83517d1
--- /dev/null
+++ b/var/spack/repos/builtin/packages/go/package.py
@@ -0,0 +1,80 @@
+import os
+import shutil
+import glob
+import llnl.util.tty as tty
+from spack import *
+
+
+class Go(Package):
+ """The golang compiler and build environment"""
+ homepage = "https://golang.org"
+ url = "https://go.googlesource.com/go"
+
+ extendable = True
+
+ version('1.5.4', git='https://go.googlesource.com/go', tag='go1.5.4')
+ version('1.6.2', git='https://go.googlesource.com/go', tag='go1.6.2')
+
+ variant('test',
+ default=True,
+ description="Run tests as part of build, a good idea but quite"
+ " time consuming")
+
+ provides('golang')
+
+ # to-do, make non-c self-hosting compilers feasible without backflips
+ # should be a dep on external go compiler
+ depends_on('go-bootstrap')
+ depends_on('git')
+
+ def install(self, spec, prefix):
+ bash = which('bash')
+ with working_dir('src'):
+ if '+test' in spec:
+ bash('all.bash')
+ else:
+ bash('make.bash')
+
+ try:
+ os.makedirs(prefix)
+ except OSError:
+ pass
+ for f in glob.glob('*'):
+ if os.path.isdir(f):
+ shutil.copytree(f, os.path.join(prefix, f))
+ else:
+ shutil.copy2(f, os.path.join(prefix, f))
+
+ def setup_environment(self, spack_env, run_env):
+ spack_env.set('GOROOT_FINAL', self.spec.prefix)
+ spack_env.set('GOROOT_BOOTSTRAP', self.spec['go-bootstrap'].prefix)
+
+ def setup_dependent_package(self, module, ext_spec):
+ """Called before go modules' install() methods.
+
+ In most cases, extensions will only need to set GOPATH and use go::
+
+ env = os.environ
+ env['GOPATH'] = self.source_path + ':' + env['GOPATH']
+ go('get', '<package>', env=env)
+ shutil.copytree('bin', os.path.join(prefix, '/bin'))
+ """
+ # Add a go command/compiler for extensions
+ module.go = Executable(join_path(self.spec.prefix.bin, 'go'))
+
+ def setup_dependent_environment(self, spack_env, run_env, ext_spec):
+ if os.environ.get('GOROOT', False):
+ tty.warn('GOROOT is set, this is not recommended')
+
+ path_components = []
+ # Set GOPATH to include paths of dependencies
+ for d in ext_spec.traverse():
+ if d.package.extends(self.spec):
+ path_components.append(d.prefix)
+
+ # This *MUST* be first, this is where new code is installed
+ spack_env.set('GOPATH', ':'.join(path_components))
+
+ # Allow packages to find this when using module or dotkit
+ run_env.prepend_path('GOPATH', ':'.join(
+ [ext_spec.prefix] + path_components))
diff --git a/var/spack/repos/builtin/packages/graphviz/package.py b/var/spack/repos/builtin/packages/graphviz/package.py
index 203e7b7f3c..2f99015ba2 100644
--- a/var/spack/repos/builtin/packages/graphviz/package.py
+++ b/var/spack/repos/builtin/packages/graphviz/package.py
@@ -23,6 +23,8 @@
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
from spack import *
+import sys
+
class Graphviz(Package):
"""Graph Visualization Software"""
@@ -35,19 +37,27 @@ class Graphviz(Package):
# related to missing Perl packages. If spack begins support for Perl in the
# future, this package can be updated to depend_on('perl') and the
# ncecessary devel packages.
- variant('perl', default=False, description='Enable if you need the optional Perl language bindings.')
+ variant('perl', default=False, description='Enable if you need the optional Perl language bindings.') # NOQA: ignore=E501
parallel = False
depends_on("swig")
depends_on("python")
depends_on("ghostscript")
+ depends_on("pkg-config")
def install(self, spec, prefix):
options = ['--prefix=%s' % prefix]
- if not '+perl' in spec:
+ if '+perl' not in spec:
options.append('--disable-perl')
+ # On OSX fix the compiler error:
+ # In file included from tkStubLib.c:15:
+ # /usr/include/tk.h:78:11: fatal error: 'X11/Xlib.h' file not found
+ # include <X11/Xlib.h>
+ if sys.platform == 'darwin':
+ options.append('CFLAGS=-I/opt/X11/include')
+
configure(*options)
make()
make("install")
diff --git a/var/spack/repos/builtin/packages/hub/package.py b/var/spack/repos/builtin/packages/hub/package.py
new file mode 100644
index 0000000000..ed8b742e42
--- /dev/null
+++ b/var/spack/repos/builtin/packages/hub/package.py
@@ -0,0 +1,24 @@
+from spack import *
+import os
+
+
+class Hub(Package):
+ """The github git wrapper"""
+ homepage = "https://github.com/github/hub"
+ url = "https://github.com/github/hub/archive/v2.2.3.tar.gz"
+
+ version('head', git='https://github.com/github/hub')
+ version('2.2.3', '6675992ddd16d186eac7ba4484d57f5b')
+ version('2.2.2', '7edc8f5b5d3c7c392ee191dd999596fc')
+ version('2.2.1', '889a31ee9d10ae9cb333480d8dbe881f')
+ version('2.2.0', 'eddce830a079b8480f104aa7496f46fe')
+ version('1.12.4', '4f2ebb14834c9981b04e40b0d1754717')
+
+ extends("go")
+
+ def install(self, spec, prefix):
+ env = os.environ
+ env['GOPATH'] = self.stage.source_path + ':' + env['GOPATH']
+ bash = which('bash')
+ bash(os.path.join('script', 'build'), '-o', os.path.join(prefix, 'bin',
+ 'hub'))
diff --git a/var/spack/repos/builtin/packages/netcdf-cxx4/package.py b/var/spack/repos/builtin/packages/netcdf-cxx4/package.py
index b67ea299a8..f8af76429b 100644
--- a/var/spack/repos/builtin/packages/netcdf-cxx4/package.py
+++ b/var/spack/repos/builtin/packages/netcdf-cxx4/package.py
@@ -24,16 +24,21 @@
##############################################################################
from spack import *
+
class NetcdfCxx4(Package):
"""C++ interface for NetCDF4"""
homepage = "http://www.unidata.ucar.edu/software/netcdf"
- url = "http://www.unidata.ucar.edu/downloads/netcdf/ftp/netcdf-cxx4-4.2.tar.gz"
+ url = "https://www.github.com/unidata/netcdf-cxx4/tarball/v4.3.0"
- version('4.2', 'd019853802092cf686254aaba165fc81')
+ version('4.3.0', '0dde8b9763eecdafbd69d076e687337e')
+ version('4.2.1', 'd019853802092cf686254aaba165fc81')
depends_on('netcdf')
+ depends_on("autoconf")
def install(self, spec, prefix):
+ # Rebuild to prevent problems of inconsistency in git repo
+ which('autoreconf')('-ivf')
configure('--prefix=%s' % prefix)
make()
make("install")
diff --git a/var/spack/repos/builtin/packages/sed/package.py b/var/spack/repos/builtin/packages/sed/package.py
new file mode 100644
index 0000000000..f2a240e1b3
--- /dev/null
+++ b/var/spack/repos/builtin/packages/sed/package.py
@@ -0,0 +1,39 @@
+##############################################################################
+# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU Lesser General Public License (as
+# published by the Free Software Foundation) version 2.1, February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU Lesser General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public
+# License along with this program; if not, write to the Free Software
+# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+from spack import *
+
+
+class Sed(Package):
+ """GNU implementation of the famous stream editor."""
+ homepage = "http://www.gnu.org/software/sed/"
+ url = "http://ftpmirror.gnu.org/sed/sed-4.2.2.tar.bz2"
+
+ version('4.2.2', '7ffe1c7cdc3233e1e0c4b502df253974')
+
+ def install(self, spec, prefix):
+ configure('--prefix=%s' % prefix)
+
+ make()
+ make("install")
diff --git a/var/spack/repos/builtin/packages/the_platinum_searcher/package.py b/var/spack/repos/builtin/packages/the_platinum_searcher/package.py
new file mode 100644
index 0000000000..9c9a66cdef
--- /dev/null
+++ b/var/spack/repos/builtin/packages/the_platinum_searcher/package.py
@@ -0,0 +1,21 @@
+from spack import *
+import os
+import shutil
+
+
+class ThePlatinumSearcher(Package):
+ """Fast parallel recursive grep alternative"""
+ homepage = "https://github.com/monochromegane/the_platinum_searcher"
+ url = "https://github.com/monochromegane/the_platinum_searcher"
+
+ package = 'github.com/monochromegane/the_platinum_searcher/...'
+
+ version('head', go=package)
+
+ extends("go")
+
+ def install(self, spec, prefix):
+ env = os.environ
+ env['GOPATH'] = self.stage.source_path + ':' + env['GOPATH']
+ go('install', self.package, env=env)
+ shutil.copytree('bin', os.path.join(prefix, 'bin'))
diff --git a/var/spack/repos/builtin/packages/turbomole/package.py b/var/spack/repos/builtin/packages/turbomole/package.py
index 3362113d13..6ccce23f97 100644
--- a/var/spack/repos/builtin/packages/turbomole/package.py
+++ b/var/spack/repos/builtin/packages/turbomole/package.py
@@ -26,21 +26,22 @@ from spack import *
import os
import subprocess
+
class Turbomole(Package):
"""TURBOMOLE: Program Package for ab initio Electronic Structure
Calculations. NB: Requires a license to download."""
-
- # NOTE: Turbomole requires purchase of a license to download. Go to the
- # NOTE: Turbomole home page, http://www.turbomole-gmbh.com, for details.
- # NOTE: Spack will search the current directory for this file. It is
- # NOTE: probably best to add this file to a Spack mirror so that it can be
- # NOTE: found from anywhere. For information on setting up a Spack mirror
- # NOTE: see http://software.llnl.gov/spack/mirrors.html
+
+ # NOTE: Turbomole requires purchase of a license to download. Go to the
+ # NOTE: Turbomole home page, http://www.turbomole-gmbh.com, for details.
+ # NOTE: Spack will search the current directory for this file. It is
+ # NOTE: probably best to add this file to a Spack mirror so that it can be
+ # NOTE: found from anywhere. For information on setting up a Spack mirror
+ # NOTE: see http://software.llnl.gov/spack/mirrors.html
homepage = "http://www.turbomole-gmbh.com/"
version('7.0.2', '92b97e1e52e8dcf02a4d9ac0147c09d6',
- url="file://%s/turbolinux702.tar.gz" % os.getcwd())
+ url="file://%s/turbolinux702.tar.gz" % os.getcwd())
variant('mpi', default=False, description='Set up MPI environment')
variant('smp', default=False, description='Set up SMP environment')
@@ -56,33 +57,31 @@ class Turbomole(Package):
def do_fetch(self, mirror_only=True):
if '+mpi' in self.spec and '+smp' in self.spec:
- raise InstallError('Can not have both SMP and MPI enabled in the same build.')
+ raise InstallError('Can not have both SMP and MPI enabled in the '
+ 'same build.')
super(Turbomole, self).do_fetch(mirror_only)
def get_tm_arch(self):
- # For python-2.7 we could use `tm_arch = subprocess.check_output()`
- # Use the following for compatibility with python 2.6
if 'TURBOMOLE' in os.getcwd():
- tm_arch = subprocess.Popen(['sh', 'scripts/sysname'],
- stdout=subprocess.PIPE).communicate()[0]
+ tm_sysname = Executable('./scripts/sysname')
+ tm_arch = tm_sysname(output=str)
return tm_arch.rstrip('\n')
else:
return
-
+
def install(self, spec, prefix):
if spec.satisfies('@:7.0.2'):
calculate_version = 'calculate_2.4_linux64'
molecontrol_version = 'MoleControl_2.5'
- tm_arch=self.get_tm_arch()
+ tm_arch = self.get_tm_arch()
tar = which('tar')
dst = join_path(prefix, 'TURBOMOLE')
tar('-x', '-z', '-f', 'thermocalc.tar.gz')
with working_dir('thermocalc'):
- cmd = 'sh install <<<y'
- subprocess.call(cmd, shell=True)
+ subprocess.call('./install<<<y', shell=True)
install_tree('basen', join_path(dst, 'basen'))
install_tree('cabasen', join_path(dst, 'cabasen'))
@@ -108,13 +107,19 @@ class Turbomole(Package):
install('TURBOMOLE_702_LinuxPC', dst)
if '+mpi' in spec:
- install_tree('bin/%s_mpi' % tm_arch, join_path(dst, 'bin', '%s_mpi' % tm_arch))
- install_tree('libso/%s_mpi' % tm_arch, join_path(dst, 'libso', '%s_mpi' % tm_arch))
- install_tree('mpirun_scripts/%s_mpi' % tm_arch, join_path(dst, 'mpirun_scripts', '%s_mpi' % tm_arch))
+ install_tree('bin/%s_mpi' % tm_arch,
+ join_path(dst, 'bin', '%s_mpi' % tm_arch))
+ install_tree('libso/%s_mpi' % tm_arch,
+ join_path(dst, 'libso', '%s_mpi' % tm_arch))
+ install_tree('mpirun_scripts/%s_mpi' % tm_arch,
+ join_path(dst, 'mpirun_scripts', '%s_mpi' % tm_arch))
elif '+smp' in spec:
- install_tree('bin/%s_smp' % tm_arch, join_path(dst, 'bin', '%s_smp' % tm_arch))
- install_tree('libso/%s_smp' % tm_arch, join_path(dst, 'libso', '%s_smp' % tm_arch))
- install_tree('mpirun_scripts/%s_smp' % tm_arch, join_path(dst, 'mpirun_scripts', '%s_smp' % tm_arch))
+ install_tree('bin/%s_smp' % tm_arch,
+ join_path(dst, 'bin', '%s_smp' % tm_arch))
+ install_tree('libso/%s_smp' % tm_arch,
+ join_path(dst, 'libso', '%s_smp' % tm_arch))
+ install_tree('mpirun_scripts/%s_smp' % tm_arch,
+ join_path(dst, 'mpirun_scripts', '%s_smp' % tm_arch))
else:
install_tree('bin/%s' % tm_arch, join_path(dst, 'bin', tm_arch))
if '+mpi' in spec or '+smp' in spec:
@@ -131,18 +136,29 @@ class Turbomole(Package):
if self.spec.satisfies('@:7.0.2'):
molecontrol_version = 'MoleControl_2.5'
- tm_arch=self.get_tm_arch()
+ tm_arch = self.get_tm_arch()
run_env.set('TURBODIR', join_path(self.prefix, 'TURBOMOLE'))
- run_env.set('MOLE_CONTROL', join_path(self.prefix, 'TURBOMOLE', molecontrol_version))
+ run_env.set('MOLE_CONTROL',
+ join_path(self.prefix, 'TURBOMOLE', molecontrol_version))
- run_env.prepend_path('PATH', join_path(self.prefix, 'TURBOMOLE', 'thermocalc'))
- run_env.prepend_path('PATH', join_path(self.prefix, 'TURBOMOLE', 'scripts'))
+ run_env.prepend_path('PATH',
+ join_path(self.prefix, 'TURBOMOLE', 'thermocalc'))
+ run_env.prepend_path('PATH',
+ join_path(self.prefix, 'TURBOMOLE', 'scripts'))
if '+mpi' in self.spec:
run_env.set('PARA_ARCH', 'MPI')
- run_env.prepend_path('PATH', join_path(self.prefix, 'TURBOMOLE', 'bin', '%s_mpi' % tm_arch))
+ run_env.prepend_path('PATH',
+ join_path(self.prefix,
+ 'TURBOMOLE', 'bin', '%s_mpi'
+ % tm_arch))
elif '+smp' in self.spec:
run_env.set('PARA_ARCH', 'SMP')
- run_env.prepend_path('PATH', join_path(self.prefix, 'TURBOMOLE', 'bin', '%s_smp' % tm_arch))
+ run_env.prepend_path('PATH',
+ join_path(self.prefix,
+ 'TURBOMOLE', 'bin', '%s_smp'
+ % tm_arch))
else:
- run_env.prepend_path('PATH', join_path(self.prefix, 'TURBOMOLE', 'bin', tm_arch))
+ run_env.prepend_path('PATH',
+ join_path(self.prefix,
+ 'TURBOMOLE', 'bin', tm_arch))
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-11-08 00:53:19 +0000