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-rw-r--r--var/spack/repos/builtin/packages/hdf-eos5/hdf-eos5.nondarwin-no-single_module.patch28
-rw-r--r--var/spack/repos/builtin/packages/hdf-eos5/package.py102
2 files changed, 130 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/hdf-eos5/hdf-eos5.nondarwin-no-single_module.patch b/var/spack/repos/builtin/packages/hdf-eos5/hdf-eos5.nondarwin-no-single_module.patch
new file mode 100644
index 0000000000..a86c85dfe6
--- /dev/null
+++ b/var/spack/repos/builtin/packages/hdf-eos5/hdf-eos5.nondarwin-no-single_module.patch
@@ -0,0 +1,28 @@
+# This patch removes the default(?) setting of passing -single_module
+# flag to the loader. From what I can gather, only the Darwin loader
+# supports that, so this patch allows building on non-Darwin systems
+
+diff -Naur spack-src/src/Makefile.am spack-src.patched/src/Makefile.am
+--- spack-src/src/Makefile.am 2007-03-29 12:59:47.000000000 -0400
++++ spack-src.patched/src/Makefile.am 2020-12-04 11:25:50.789164073 -0500
+@@ -10,7 +10,7 @@
+
+ # Set LDFLAGS to allow the HDF-EOS library to use extern variables from
+ # HDF5
+-LDFLAGS=-Wl,-single_module
++#LDFLAGS=-Wl,-single_module
+
+ # Build HDF-EOS5
+ lib_LTLIBRARIES=libhe5_hdfeos.la
+diff -Naur spack-src/src/Makefile.in spack-src.patched/src/Makefile.in
+--- spack-src/src/Makefile.in 2010-08-30 11:47:05.000000000 -0400
++++ spack-src.patched/src/Makefile.in 2020-12-04 11:26:00.201443245 -0500
+@@ -126,7 +126,7 @@
+
+ # Set LDFLAGS to allow the HDF-EOS library to use extern variables from
+ # HDF5
+-LDFLAGS = -Wl,-single_module
++#LDFLAGS = -Wl,-single_module
+ LIBOBJS = @LIBOBJS@
+ LIBS = @LIBS@
+ LIBTOOL = @LIBTOOL@
diff --git a/var/spack/repos/builtin/packages/hdf-eos5/package.py b/var/spack/repos/builtin/packages/hdf-eos5/package.py
new file mode 100644
index 0000000000..5f4e24fe35
--- /dev/null
+++ b/var/spack/repos/builtin/packages/hdf-eos5/package.py
@@ -0,0 +1,102 @@
+# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+import sys
+
+
+class HdfEos5(AutotoolsPackage):
+ """HDF-EOS (Hierarchical Data Format - Earth Observing System) is a
+ self-describing file format based upon HDF for standard data products
+ that are derived from EOS missions. HDF-EOS5 is based upon HDF5.
+ """
+
+ homepage = "https://hdfeos.org"
+ # The download URLs are messing, and include sha256 checksum.
+ # This is just a template. See version_list and url_for_version below
+ # Template for url_for_version. 0 is sha256 checksum, 1 is filename
+ url = "https://git.earthdata.nasa.gov/rest/git-lfs/storage/DAS/hdfeos5/{0}?response-content-disposition=attachment%3B%20filename%3D%22{1}%22%3B%20filename*%3Dutf-8%27%27{1}"
+
+ # Crazy URL scheme, differing with each version, and including the
+ # sha256 checksum in the URL. Yuck
+ # The data in version_list is used to generate versions and urls
+ # In basename expansions, 0 is raw version,
+ # 1 is for version with dots => underscores
+ version_list = [
+ {'version': '5.1.16',
+ 'sha256': '7054de24b90b6d9533329ef8dc89912c5227c83fb447792103279364e13dd452',
+ 'basename': 'HDF-EOS{0}.tar.Z'},
+ {'version': '5.1.15',
+ 'sha256': 'fbf4d085f9bf6ffad259aee1e9f60cf060e7e99c447894ad8955df02de83c92c',
+ 'basename': 'hdfeos{1}.zip'}
+ ]
+
+ for vrec in version_list:
+ ver = vrec['version']
+ sha256 = vrec['sha256']
+ version(ver, sha256=sha256)
+
+ variant('shared', default=True,
+ description='Build shared libraries (can be used with +static)')
+ variant('static', default=True,
+ description='Build shared libraries (can be used with +shared)')
+
+ conflicts('~static', when='~shared',
+ msg='At least one of +static or +shared must be set')
+
+ # Build dependencies
+ depends_on('hdf5')
+
+ # The standard Makefile.am, etc. add a --single_module flag to LDFLAGS
+ # to pass to the linker.
+ # That appears to be only recognized by the Darwin linker, remove it
+ # if we are not running on darwin/
+ if sys.platform != "darwin":
+ patch('hdf-eos5.nondarwin-no-single_module.patch')
+
+ def url_for_version(self, version):
+ vrec = [x for x in self.version_list
+ if x['version'] == version.dotted.string]
+ if vrec:
+ fname = vrec[0]['basename'].format(version.dotted,
+ version.underscored)
+ sha256 = vrec[0]['sha256']
+ myurl = self.url.format(sha256, fname)
+ return myurl
+ else:
+ sys.exit('ERROR: cannot generate URL for version {0};'
+ 'version/checksum not found in version_list'.format(
+ version))
+
+ def configure_args(self):
+ extra_args = []
+
+ # Package really wants h5cc to be used
+ if self.spec['mpi']:
+ extra_args.append('CC={0}/bin/h5pcc -Df2cFortran'.format(
+ self.spec['hdf5'].prefix))
+ else:
+ extra_args.append('CC={0}/bin/h5cc -Df2cFortran'.format(
+ self.spec['hdf5'].prefix))
+
+ # We always build PIC code
+ extra_args.append('--with-pic')
+ # We always enable installation of include directories
+ extra_args.append('--enable-install-include')
+
+ # Set shared/static appropriately
+ extra_args.extend(self.enable_or_disable('shared'))
+ extra_args.extend(self.enable_or_disable('static'))
+
+ # Provide config args for dependencies
+ extra_args.append('--with-hdf5={0}'.format(self.spec['hdf5'].prefix))
+ if self.spec['zlib']:
+ extra_args.append('--with-zlib={0}'.format(
+ self.spec['zlib'].prefix))
+ if self.spec['szip']:
+ extra_args.append('--with-szlib={0}'.format(
+ self.spec['szip'].prefix))
+
+ return extra_args