diff options
| -rw-r--r-- | var/spack/repos/builtin/packages/vcftools/package.py | 11 |
1 files changed, 10 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/vcftools/package.py b/var/spack/repos/builtin/packages/vcftools/package.py index 944760be38..e592728113 100644 --- a/var/spack/repos/builtin/packages/vcftools/package.py +++ b/var/spack/repos/builtin/packages/vcftools/package.py @@ -16,6 +16,7 @@ class Vcftools(AutotoolsPackage): homepage = "https://vcftools.github.io/" url = "https://github.com/vcftools/vcftools/releases/download/v0.1.14/vcftools-0.1.14.tar.gz" + version("0.1.16", sha256="dbfc774383c106b85043daa2c42568816aa6a7b4e6abc965eeea6c47dde914e3") # this is "a pre-release" # version('0.1.15', sha256='31e47afd5be679d89ece811a227525925b6907cce4af2c86f10f465e080383e3') version("0.1.14", sha256="76d799dd9afcb12f1ed42a07bc2886cd1a989858a4d047f24d91dcf40f608582") @@ -26,7 +27,15 @@ class Vcftools(AutotoolsPackage): # this needs to be in sync with what setup_run_environment adds to # PERL5LIB below def configure_args(self): - return ["--with-pmdir={0}".format(self.prefix.lib)] + args = [] + # between 0.1.16 and 14 the behavior of the configure script + # wrt the perl lib dir changed and it became relative to the + # install directory, if you specify the whole prefix in + # it now you end up with a nasty recreation of the + # prefix tree in self.prefix. + if self.spec.satisfies("@:0.1.14"): + args.append(f"--with-pmdir={self.prefix.lib}") + return args @run_before("install") def filter_sbang(self): |