diff options
| -rw-r--r-- | var/spack/repos/builtin/packages/nextflow/package.py | 31 |
1 files changed, 26 insertions, 5 deletions
diff --git a/var/spack/repos/builtin/packages/nextflow/package.py b/var/spack/repos/builtin/packages/nextflow/package.py index 92e11bbc9f..a91badd5ed 100644 --- a/var/spack/repos/builtin/packages/nextflow/package.py +++ b/var/spack/repos/builtin/packages/nextflow/package.py @@ -1,6 +1,29 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the LICENSE file for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## from spack import * -from glob import glob -import os + class Nextflow(Package): """Data-driven computational pipelines""" @@ -17,8 +40,6 @@ class Nextflow(Package): pass def install(self, spec, prefix): - chmod = which('chmod') - mkdirp(prefix.bin) install("nextflow", join_path(prefix.bin, "nextflow")) - chmod('+x', join_path(prefix.bin, "nextflow")) + set_executable( join_path(prefix.bin, "nextflow")) |