diff options
| -rw-r--r-- | .gitignore | 2 | ||||
| -rw-r--r-- | lib/spack/spack/cmd/package-list.py | 24 | ||||
| -rw-r--r-- | var/spack/repos/builtin/packages/mkl/package.py | 38 |
3 files changed, 50 insertions, 14 deletions
diff --git a/.gitignore b/.gitignore index 040df3eafd..bfc6172a4e 100644 --- a/.gitignore +++ b/.gitignore @@ -1,7 +1,7 @@ /var/spack/stage /var/spack/cache *.pyc -/opt/ +/opt *~ .DS_Store .idea diff --git a/lib/spack/spack/cmd/package-list.py b/lib/spack/spack/cmd/package-list.py index bc64c77eab..a27502d30e 100644 --- a/lib/spack/spack/cmd/package-list.py +++ b/lib/spack/spack/cmd/package-list.py @@ -22,10 +22,8 @@ # License along with this program; if not, write to the Free Software # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA ############################################################################## -import re import cgi from StringIO import StringIO -import llnl.util.tty as tty from llnl.util.tty.colify import * import spack @@ -34,21 +32,22 @@ description = "Print a list of all packages in reStructuredText." def github_url(pkg): """Link to a package file on github.""" - return ("https://github.com/llnl/spack/blob/master/var/spack/packages/%s/package.py" % - pkg.name) + url = "https://github.com/llnl/spack/blob/master/var/spack/packages/%s/package.py" # NOQA: ignore=E501 + return (url % pkg.name) def rst_table(elts): """Print out a RST-style table.""" cols = StringIO() ncol, widths = colify(elts, output=cols, tty=True) - header = " ".join("=" * (w-1) for w in widths) + header = " ".join("=" * (w - 1) for w in widths) return "%s\n%s%s" % (header, cols.getvalue(), header) def print_rst_package_list(): """Print out information on all packages in restructured text.""" - pkgs = sorted(spack.repo.all_packages(), key=lambda s:s.name.lower()) + pkgs = sorted(spack.repo.all_packages(), key=lambda s: s.name.lower()) + pkg_names = [p.name for p in pkgs] print ".. _package-list:" print @@ -62,7 +61,7 @@ def print_rst_package_list(): print "Spack currently has %d mainline packages:" % len(pkgs) print - print rst_table("`%s`_" % p.name for p in pkgs) + print rst_table("`%s`_" % p for p in pkg_names) print print "-----" @@ -79,14 +78,15 @@ def print_rst_package_list(): print if pkg.versions: print "Versions:" - print " " + ", ".join(str(v) for v in reversed(sorted(pkg.versions))) + print " " + ", ".join(str(v) for v in + reversed(sorted(pkg.versions))) - for deptype in ('build', 'link', 'run'): - deps = pkg.dependencies(deptype) + for deptype in spack.alldeps: + deps = pkg.dependencies_of_type(deptype) if deps: print "%s Dependencies" % deptype.capitalize() - print " " + ", ".join("`%s`_" % d if d != "mpi" else d - for d in build_deps) + print " " + ", ".join("%s_" % d if d in pkg_names + else d for d in deps) print print "Description:" diff --git a/var/spack/repos/builtin/packages/mkl/package.py b/var/spack/repos/builtin/packages/mkl/package.py index 454e78d29c..6ea64f5313 100644 --- a/var/spack/repos/builtin/packages/mkl/package.py +++ b/var/spack/repos/builtin/packages/mkl/package.py @@ -9,7 +9,13 @@ class Mkl(IntelInstaller): Note: You will have to add the download file to a mirror so that Spack can find it. For instructions on how to set up a - mirror, see http://software.llnl.gov/spack/mirrors.html""" + mirror, see http://software.llnl.gov/spack/mirrors.html. + + To set the threading layer at run time set MKL_THREADING_LAYER + variable to one of the following values: INTEL, SEQUENTIAL, PGI. + To set interface layer at run time, use set the MKL_INTERFACE_LAYER + variable to LP64 or ILP64. + """ homepage = "https://software.intel.com/en-us/intel-mkl" @@ -18,6 +24,11 @@ class Mkl(IntelInstaller): version('11.3.3.210', 'f72546df27f5ebb0941b5d21fd804e34', url="file://%s/l_mkl_11.3.3.210.tgz" % os.getcwd()) + # virtual dependency + provides('blas') + provides('lapack') + # TODO: MKL also provides implementation of Scalapack. + def install(self, spec, prefix): self.intel_prefix = os.path.join(prefix, "pkg") @@ -26,3 +37,28 @@ class Mkl(IntelInstaller): mkl_dir = os.path.join(self.intel_prefix, "mkl") for f in os.listdir(mkl_dir): os.symlink(os.path.join(mkl_dir, f), os.path.join(self.prefix, f)) + + def setup_dependent_package(self, module, dspec): + # For now use Single Dynamic Library: + # To set the threading layer at run time, use the + # mkl_set_threading_layer function or set MKL_THREADING_LAYER + # variable to one of the following values: INTEL, SEQUENTIAL, PGI. + # To set interface layer at run time, use the mkl_set_interface_layer + # function or set the MKL_INTERFACE_LAYER variable to LP64 or ILP64. + + # Otherwise one would need to specify several libraries + # (e.g. mkl_intel_lp64;mkl_sequential;mkl_core), which reflect + # different interface and threading layers. + + name = 'libmkl_rt.%s' % dso_suffix + libdir = find_library_path(name, self.prefix.lib64, self.prefix.lib) + + self.spec.blas_shared_lib = join_path(libdir, name) + self.spec.lapack_shared_lib = self.spec.blas_shared_lib + + def setup_dependent_environment(self, spack_env, run_env, dependent_spec): + # set up MKLROOT for everyone using MKL package + spack_env.set('MKLROOT', self.prefix) + + def setup_environment(self, spack_env, env): + env.set('MKLROOT', self.prefix) |