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| -rw-r--r-- | var/spack/repos/builtin/packages/gemma/package.py | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/gemma/package.py b/var/spack/repos/builtin/packages/gemma/package.py new file mode 100644 index 0000000000..7f11d320f4 --- /dev/null +++ b/var/spack/repos/builtin/packages/gemma/package.py @@ -0,0 +1,30 @@ +# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Gemma(MakefilePackage): + """GEMMA is a software toolkit for fast application of linear mixed models + (LMMs) and related models to genome-wide association studies (GWAS) and + other large-scale data sets.""" + + homepage = "https://github.com/genetics-statistics/GEMMA" + url = "https://github.com/genetics-statistics/GEMMA/archive/refs/tags/v0.98.5.tar.gz" + + maintainers = ['snehring', 'dlkuehn'] + + version('0.98.5', sha256='3ed336deee29e370f96ec8f1a240f7b62550e57dcd1694245ce7ec8f42241677') + + depends_on('zlib') + # openblas is the default + # other lapack implementors can be made to work + # but must provide cblas, blas, and lapack libs + depends_on('openblas') + depends_on('gsl@2:') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('bin/gemma', prefix.bin) |