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| -rw-r--r-- | var/spack/repos/builtin/packages/unblur/package.py | 72 |
1 files changed, 72 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/unblur/package.py b/var/spack/repos/builtin/packages/unblur/package.py new file mode 100644 index 0000000000..0b971d756d --- /dev/null +++ b/var/spack/repos/builtin/packages/unblur/package.py @@ -0,0 +1,72 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/spack/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Unblur(AutotoolsPackage): + """Unblur is used to align the frames of movies recorded on an electron + microscope to reduce image blurring due to beam-induced motion.""" + + homepage = "http://grigoriefflab.janelia.org/unblur" + url = "http://grigoriefflab.janelia.org/sites/default/files/unblur_1.0.2.tar.gz" + + version('1.0.2', 'b6e367061cd0cef1b62a391a6289f681') + + variant('openmp', default=True, description='Enable OpenMP support') + variant('shared', default=True, description='Dynamic linking') + + depends_on('zlib') + depends_on('jpeg') + depends_on('libtiff') + depends_on('gsl') + depends_on('jbigkit') + depends_on('fftw@3:') + # Requires Intel Fortran compiler + conflicts('%gcc') + conflicts('%pgi') + conflicts('%clang') + conflicts('%cce') + conflicts('%xl') + conflicts('%xl_r') + conflicts('%nag') + + configure_directory = 'src' + + def patch(self): + filter_file(r'<<<<<<<.*', '', 'src/missing') + + def configure_args(self): + spec = self.spec + return ['FC=ifort', + 'F77=ifort', + '--enable-static={0}' + .format('yes' if '~shared' in spec else 'no'), + '--enable-openmp={0}' + .format('yes' if '+openmp' in spec else 'no'), + '--enable-optimisations=yes'] + + def build(self, spec, prefix): + with working_dir('src'): + make(parallel=False) |