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-rw-r--r-- | var/spack/repos/builtin/packages/freesurfer/package.py | 40 |
1 files changed, 40 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/freesurfer/package.py b/var/spack/repos/builtin/packages/freesurfer/package.py new file mode 100644 index 0000000000..02226d5486 --- /dev/null +++ b/var/spack/repos/builtin/packages/freesurfer/package.py @@ -0,0 +1,40 @@ +# Copyright 2013-2022 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Freesurfer(Package): + """Freesurfer is an open source software suite for processing and analyzing + (human) brain MRI images.""" + + homepage = "https://freesurfer.net/" + + # A license is required, but is free to obtain. + license_required = True + license_files = ["./license.txt"] + + maintainers = ["robgics"] + + version("7.2.0", sha256="4cca78602f898bf633428b9d82cbb9b07e3ab97a86c620122050803779c86d62") + version("7.1.1", sha256="6098b166fee8644f44f9ec88f3ffe88d05f2bc033cca60443e99e3e56f2e166b") + version("7.1.0", sha256="1b8f26fe5c712433ddb74c47fe1895ed1d9fbff46cfae8aaae2697cb65ae8840") + + depends_on("mesa-glu") + depends_on("qt") + + def url_for_version(self, version): + return "https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/{0}/freesurfer-linux-centos7_x86_64-{1}.tar.gz".format( + version, version + ) + + def setup_run_environment(self, env): + env.prepend_path("PATH", self.prefix.bin) + env.set("FREESURFER_HOME", self.prefix) + env.set("SUBJECTS_DIR", join_path(self.prefix, "subjects")) + env.set("FUNCTIONALS_DIR", join_path(self.prefix, "sessions")) + + def install(self, spec, prefix): + install_tree(".", prefix) |