summaryrefslogtreecommitdiff
diff options
context:
space:
mode:
-rw-r--r--var/spack/repos/builtin/packages/sicer2/package.py21
1 files changed, 21 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/sicer2/package.py b/var/spack/repos/builtin/packages/sicer2/package.py
new file mode 100644
index 0000000000..6a6f79a957
--- /dev/null
+++ b/var/spack/repos/builtin/packages/sicer2/package.py
@@ -0,0 +1,21 @@
+# Copyright 2013-2024 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class Sicer2(PythonPackage):
+ """SICER2: a redesigned and improved ChIP-seq broad peak calling tool"""
+
+ homepage = "https://zanglab.github.io/SICER2/"
+ pypi = "SICER2/SICER2-1.0.3.tar.gz"
+
+ license("MIT", checked_by="A-N-Other")
+
+ version("1.0.3", sha256="003e0f46fb45717fa6b1c94b2c21416161f5b3a4896fbb335cf2024daf2560dd")
+
+ depends_on("py-setuptools", type="build")
+ depends_on("py-numpy", type=("build", "run"))
+ depends_on("py-scipy@1.0.0:", type=("build", "run"))