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-rw-r--r--var/spack/repos/builtin/packages/r-sseq/package.py20
1 files changed, 20 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/r-sseq/package.py b/var/spack/repos/builtin/packages/r-sseq/package.py
new file mode 100644
index 0000000000..2caf474019
--- /dev/null
+++ b/var/spack/repos/builtin/packages/r-sseq/package.py
@@ -0,0 +1,20 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class RSseq(RPackage):
+ """Shrinkage estimation of dispersion in Negative Binomial models for
+ RNA-seq experiments with small sample size"""
+
+ homepage = "https://www.bioconductor.org/packages/sSeq/"
+ url = "https://www.bioconductor.org/packages/release/bioc/src/contrib/sSeq_1.20.0.tar.gz"
+
+ version('1.20.0', sha256='0fddcb238a6c401987843debe5b46dc03c22a1ee04df670f0d502e86a4f2144f')
+
+ depends_on('r@3.0:', type=('build', 'run'))
+ depends_on('r-catools', type=('build', 'run'))
+ depends_on('r-rcolorbrewer', type=('build', 'run'))