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-rw-r--r--var/spack/repos/builtin/packages/sbml/package.py5
-rw-r--r--var/spack/repos/builtin/packages/wcs/package.py33
2 files changed, 37 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/sbml/package.py b/var/spack/repos/builtin/packages/sbml/package.py
index 4c90d76bc2..22c608d156 100644
--- a/var/spack/repos/builtin/packages/sbml/package.py
+++ b/var/spack/repos/builtin/packages/sbml/package.py
@@ -59,6 +59,9 @@ class Sbml(CMakePackage):
description='Build with mono support')
depends_on('mono', when="+mono")
+ variant('cpp', default=False,
+ description="All c++ includes should be under a namespace")
+
depends_on('swig@2:', type='build')
depends_on('cmake', type='build')
depends_on('zlib')
@@ -76,7 +79,6 @@ class Sbml(CMakePackage):
"-DENABLE_RENDER:BOOL=ON",
"-DWITH_BZIP2:BOOL=ON",
"-DWITH_CHECK:BOOL=OFF",
- "-DWITH_CPP_NAMESPACE:BOOL=OFF",
"-DWITH_DOXYGEN:BOOL=OFF",
"-DWITH_EXAMPLES:BOOL=OFF",
"-DWITH_EXPAT:BOOL=OFF",
@@ -86,6 +88,7 @@ class Sbml(CMakePackage):
"-DWITH_XERCES:BOOL=OFF",
"-DWITH_ZLIB:BOOL=ON",
]
+ args.append(self.define_from_variant('WITH_CPP_NAMESPACE', 'cpp'))
if '+python' in spec:
args.extend([
"-DWITH_PYTHON:BOOL=ON",
diff --git a/var/spack/repos/builtin/packages/wcs/package.py b/var/spack/repos/builtin/packages/wcs/package.py
new file mode 100644
index 0000000000..44a39cccbe
--- /dev/null
+++ b/var/spack/repos/builtin/packages/wcs/package.py
@@ -0,0 +1,33 @@
+# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class Wcs(CMakePackage):
+ """Simulates whole cell models using discrete event simulation."""
+
+ homepage = "https://github.com/LLNL/wcs.git"
+ git = "https://github.com/LLNL/wcs.git"
+ maintainers = ['rblake-llnl']
+
+ version('master', branch='master')
+ version('develop', branch='devel')
+
+ depends_on('boost+graph+filesystem+regex+system')
+ depends_on('sbml@5.18.0:+cpp')
+ depends_on('cmake@3.12:', type='build')
+ depends_on('cereal', type='build')
+
+ def cmake_args(self):
+ spec = self.spec
+ args = [
+ "-DBOOST_ROOT:PATH=" + spec['boost'].prefix,
+ "-DCEREAL_ROOT:PATH=" + spec['cereal'].prefix,
+ "-DSBML_ROOT:PATH=" + spec['sbml'].prefix,
+ "-DWCS_WITH_SBML:BOOL=ON",
+ "-DWCS_WITH_EXPRTK:BOOL=ON",
+ ]
+ return args