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-rw-r--r--var/spack/packages/arpack/package.py22
-rw-r--r--var/spack/packages/arpack/package.py.save15
-rw-r--r--var/spack/packages/boxlib/package.py15
-rw-r--r--var/spack/packages/cblas/package.py22
-rw-r--r--var/spack/packages/cgm/package.py22
-rw-r--r--var/spack/packages/fastmath/package.py15
-rw-r--r--var/spack/packages/hdf5/package.py6
-rw-r--r--var/spack/packages/hypre/package.py33
-rw-r--r--var/spack/packages/hypre/package.py.save26
-rw-r--r--var/spack/packages/metis/package.py29
-rw-r--r--var/spack/packages/parpack/package.py26
-rw-r--r--var/spack/packages/petsc/package.py35
-rw-r--r--var/spack/packages/zoltan_distrib/package.py33
13 files changed, 279 insertions, 20 deletions
diff --git a/var/spack/packages/arpack/package.py b/var/spack/packages/arpack/package.py
new file mode 100644
index 0000000000..22781262a7
--- /dev/null
+++ b/var/spack/packages/arpack/package.py
@@ -0,0 +1,22 @@
+from spack import *
+
+class Arpack(Package):
+ """FIXME: put a proper description of your package here."""
+ homepage = "http://www.caam.rice.edu/software/ARPACK/"
+ url = "http://www.caam.rice.edu/software/ARPACK/SRC/arpack96.tar.gz"
+
+ version('96', 'fffaa970198b285676f4156cebc8626e')
+
+ depends_on('blas')
+ depends_on('lapack')
+
+ def install(self, spec, prefix):
+ move('./ARMAKES/ARmake.CRAY', './ARmake.inc')
+ filter_file('PLAT = CRAY', 'PLAT = ', './ARmake.inc', string=True)
+ filter_file('home = $(HOME)/ARPACK', 'home = %s' % pwd(), './ARmake.inc', string=True)
+ filter_file('BLASdir = $(home)/BLAS', 'BLASdir = %s' % spec['blas'].prefix, './ARmake.inc', string=True)
+ filter_file('LAPACKdir = $(home)/LAPACK', 'LAPACKdir = %s' % spec['lapack'].prefix, './ARmake.inc', string=True)
+ filter_file('ARPACKLIB = $(home)/libarpack_$(PLAT).a', 'ARPACKLIB = %s/lib/libarpack.a' % prefix, './ARmake.inc', string=True)
+
+ cd('./SRC')
+ make('all')
diff --git a/var/spack/packages/arpack/package.py.save b/var/spack/packages/arpack/package.py.save
new file mode 100644
index 0000000000..fe4f7999c6
--- /dev/null
+++ b/var/spack/packages/arpack/package.py.save
@@ -0,0 +1,15 @@
+from spack import *
+
+class Arpack(Package):
+ """ARPACK is a collection of Fortran77 subroutines designed to solve large scale eigenvalue problems."""
+
+ homepage = "http://www.caam.rice.edu/software/ARPACK/"
+ url = "http://www.caam.rice.edu/software/ARPACK/SRC/arpack96.tar.gz"
+
+ version('96', 'fffaa970198b285676f4156cebc8626e')
+
+ depends_on("blas")
+ depends_on("lapack")
+
+ def install(self, spec, prefix):
+
diff --git a/var/spack/packages/boxlib/package.py b/var/spack/packages/boxlib/package.py
new file mode 100644
index 0000000000..3e71a1383d
--- /dev/null
+++ b/var/spack/packages/boxlib/package.py
@@ -0,0 +1,15 @@
+from spack import *
+
+class Boxlib(Package):
+ """BoxLib, a software framework for massively parallel block-structured adaptive mesh refinement (AMR) codes."""
+
+ homepage = "https://ccse.lbl.gov/BoxLib/"
+ url = "https://ccse.lbl.gov/pub/Downloads/BoxLib.git";
+
+ version('master', 'https://ccse.lbl.gov/pub/Downloads/BoxLib.git')
+
+ def install(self, spec, prefix):
+ #configure("--prefix=%s" % prefix)
+ #make()
+ #make("install")
+ cd(pwd())
diff --git a/var/spack/packages/cblas/package.py b/var/spack/packages/cblas/package.py
new file mode 100644
index 0000000000..81dac667d1
--- /dev/null
+++ b/var/spack/packages/cblas/package.py
@@ -0,0 +1,22 @@
+from spack import *
+import os
+
+class Cblas(Package):
+ """The BLAS (Basic Linear Algebra Subprograms) are routines that provide standard
+ building blocks for performing basic vector and matrix operations."""
+
+ homepage = "http://www.netlib.org/blas/_cblas/"
+
+ version('unversioned', '1e8830f622d2112239a4a8a83b84209a',
+ url='http://www.netlib.org/blas/blast-forum/cblas.tgz')
+
+ depends_on('blas')
+ parallel = False
+
+ def install(self, spec, prefix):
+ filter_file('BLLIB = /Users/julie/Documents/Boulot/lapack-dev/lapack/trunk/blas_LINUX.a', 'BLLIB = %s/libblas.a' % spec['blas'].prefix.lib, './Makefile.in', string=True)
+
+ make('all') # Compile.
+ mkdirp('%s' % prefix.lib) # Create the lib dir inside the install dir.
+ move('./lib/cblas_LINUX.a', '%s/libcblas.a' % prefix.lib) # Rename the generated lib file to libcblas.a
+
diff --git a/var/spack/packages/cgm/package.py b/var/spack/packages/cgm/package.py
new file mode 100644
index 0000000000..7f32458c72
--- /dev/null
+++ b/var/spack/packages/cgm/package.py
@@ -0,0 +1,22 @@
+from spack import *
+
+class Cgm(Package):
+ """The Common Geometry Module, Argonne (CGMA) is a code library which provides geometry functionality used for mesh generation and other applications."""
+ homepage = "http://trac.mcs.anl.gov/projects/ITAPS/wiki/CGM"
+ url = "http://ftp.mcs.anl.gov/pub/fathom/cgm13.1.1.tar.gz"
+
+ version('13.1.1', '4e8dbc4ba8f65767b29f985f7a23b01f')
+ version('13.1.0', 'a6c7b22660f164ce893fb974f9cb2028')
+ version('13.1' , '95f724bda04919fc76818a5b7bc0b4ed')
+
+ depends_on("openmpi")
+
+ def install(self, spec, prefix):
+ configure("--with-mpi",
+ "--prefix=%s" % prefix,
+ "CFLAGS=-static",
+ "CXXFLAGS=-static",
+ "FCFLAGS=-static")
+
+ make()
+ make("install")
diff --git a/var/spack/packages/fastmath/package.py b/var/spack/packages/fastmath/package.py
new file mode 100644
index 0000000000..a09a459000
--- /dev/null
+++ b/var/spack/packages/fastmath/package.py
@@ -0,0 +1,15 @@
+from spack import *
+
+class Fastmath(Package):
+ """Dummy groupinstall package that installs all packages in the fastmath suite."""
+
+ homepage = "http://redmine.scorec.rpi.edu/projects/fastmath"
+ url = "http://www.netlib.org/blas/blas.tgz"
+
+ version('1.0', '5e99e975f7a1e3ea6abcad7c6e7e42e6')
+
+ depends_on('blas')
+ depends_on('lapack')
+
+ def install(self, spec, prefix):
+ pwd()
diff --git a/var/spack/packages/hdf5/package.py b/var/spack/packages/hdf5/package.py
index 992dd8ec70..1dfd3c0345 100644
--- a/var/spack/packages/hdf5/package.py
+++ b/var/spack/packages/hdf5/package.py
@@ -23,9 +23,9 @@ class Hdf5(Package):
"--prefix=%s" % prefix,
"--with-zlib=%s" % spec['zlib'].prefix,
"--enable-parallel",
- "--enable-shared",
- "CC=%s" % spec['mpich'].prefix.bin + "/mpicc",
- "CXX=%s" % spec['mpich'].prefix.bin + "/mpic++")
+ "--enable-shared")
+ # "CC=%s" % spec['mpich'].prefix.bin + "/mpicc",
+ # "CXX=%s" % spec['mpich'].prefix.bin + "/mpic++")
make()
make("install")
diff --git a/var/spack/packages/hypre/package.py b/var/spack/packages/hypre/package.py
new file mode 100644
index 0000000000..34bdab57a1
--- /dev/null
+++ b/var/spack/packages/hypre/package.py
@@ -0,0 +1,33 @@
+from spack import *
+
+class Hypre(Package):
+ """Hypre is a library of high performance preconditioners that features parallel multigrid
+ methods for both structured and unstructured grid problems."""
+
+ homepage = "https://computation.llnl.gov/project/linear_solvers/software.php"
+ url = "https://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz"
+
+ version('2.10.0b', '768be38793a35bb5d055905b271f5b8e')
+
+ depends_on("openmpi")
+ depends_on("blas")
+ depends_on("lapack")
+
+ def install(self, spec, prefix):
+ blas_dir = spec['blas'].prefix
+ lapack_dir = spec['lapack'].prefix
+
+ # Hypre's source is staged under ./src so we'll have to manually
+ # cd into it.
+ cd("./src")
+
+ configure(
+ "--prefix=%s" % prefix,
+ "--with-blas-libs=blas",
+ "--with-blas-lib-dirs=%s/lib" % blas_dir,
+ "--with-lapack-libs=\"lapack blas\"",
+ "--with-lapack-lib-dirs=%s/lib" % lapack_dir,
+ "--with-MPI")
+
+ make()
+ make("install")
diff --git a/var/spack/packages/hypre/package.py.save b/var/spack/packages/hypre/package.py.save
new file mode 100644
index 0000000000..532a1a3c5f
--- /dev/null
+++ b/var/spack/packages/hypre/package.py.save
@@ -0,0 +1,26 @@
+from spack import *
+
+class Hypre(Package):
+ """Hypre is a library of high performance preconditioners that features parallel multigrid
+ methods for both structured and unstructured grid problems."""
+
+ homepage = "https://computation.llnl.gov/project/linear_solvers/software.php"
+ url = "https://computation.llnl.gov/project/linear_solvers/download/hypre-2.10.0b.tar.gz"
+
+ version('2.10.0b', '768be38793a35bb5d055905b271f5b8e')
+
+ depends_on("openmpi")
+ depends_on("blas")
+ depends_on("lapack")
+
+ def install(self, spec, prefix):
+ lapack_dir = spec['lapack'].prefix
+ configure(
+ "--prefix=%s" % prefix,
+ "--with-blas-libs=blas",
+ "--with-blas-lib-dirs=%s/lib" % spec['blas'].prefix,
+ "--with-lapack-libs=lapack blas",
+ "--with-lapack-lib-dirs=%s/lib" % lapack_dir)
+
+ make()
+ make("install")
diff --git a/var/spack/packages/metis/package.py b/var/spack/packages/metis/package.py
index fa13d52127..7ce5ae1925 100644
--- a/var/spack/packages/metis/package.py
+++ b/var/spack/packages/metis/package.py
@@ -5,28 +5,23 @@ class Metis(Package):
partitioning finite element meshes, and producing fill reducing
orderings for sparse matrices. The algorithms implemented in
METIS are based on the multilevel recursive-bisection,
- multilevel k-way, and multi-constraint partitioning schemes
- developed in our lab."""
+ multilevel k-way, and multi-constraint partitioning schemes."""
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview"
url = "http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/metis-5.1.0.tar.gz"
version('5.1.0', '5465e67079419a69e0116de24fce58fe')
- # FIXME: Add dependencies if this package requires them.
- # depends_on("foo")
-
- def patch(self):
- filter_file(r'#define IDXTYPEWIDTH 32', '#define IDXTYPEWIDTH 64', 'include/metis.h',
- string=True)
-
+ depends_on('mpi')
def install(self, spec, prefix):
- with working_dir('spack-build', create=True):
- cmake('..',
- '-DGKLIB_PATH=../GKlib',
- '-DBUILD_SHARED_LIBS=TRUE',
- *std_cmake_args)
- make()
- make("install")
-
+ cmake(".",
+ '-DGKLIB_PATH=%s/GKlib' % pwd(),
+ '-DSHARED=1',
+ '-DCMAKE_C_COMPILER=mpicc',
+ '-DCMAKE_CXX_COMPILER=mpicxx',
+ '-DSHARED=1',
+ *std_cmake_args)
+
+ make()
+ make("install")
diff --git a/var/spack/packages/parpack/package.py b/var/spack/packages/parpack/package.py
new file mode 100644
index 0000000000..1b9faf9354
--- /dev/null
+++ b/var/spack/packages/parpack/package.py
@@ -0,0 +1,26 @@
+from spack import *
+
+class Parpack(Package):
+ """ARPACK is a collection of Fortran77 subroutines designed to solve large
+ scale eigenvalue problems."""
+
+ homepage = "http://www.caam.rice.edu/software/ARPACK/download.html"
+ url = "http://www.caam.rice.edu/software/ARPACK/SRC/parpack96.tar.Z"
+
+ version('96', 'a175f70ff71837a33ff7e4b0b6054f43')
+
+ depends_on('blas')
+ depends_on('lapack')
+
+ def install(self, spec, prefix):
+ move("./ARMAKES/ARmake.CJ", "./ARmake.inc");
+ filter_file('home = /home1/Netlib/ARPACK', 'home = %s' % pwd(), './ARmake.inc', string=True)
+ filter_file('PLAT = CJ', 'PLAT = ', './ARmake.inc', string=True)
+ filter_file('LAPACKdir = $(home)/LAPACK', 'LAPACKLIB = %s' % spec['lapack'].prefix, './ARmake.inc', string=True)
+ filter_file('BLASdir = $(home)/BLAS', 'BLASLIB = %s' % spec['blas'].prefix, './ARmake.inc', string=True)
+ filter_file('ARPACKLIB = $(home)/libarpack_$(PLAT).a', 'ARPACKLIB = %s/libarpack.a' % prefix, './ARmake.inc', string=True)
+ filter_file('MAKE = /bin/make', 'MAKE = make', './ARmake.inc', string=True)
+ filter_file('FFLAGS', '#FFLAGS', './ARmake.inc', string=True)
+ filter_file('FC = f77', 'FC = gfortran', './ARmake.inc', string=True)
+ cd('./PARPACK/SRC/MPI')
+ make('all')
diff --git a/var/spack/packages/petsc/package.py b/var/spack/packages/petsc/package.py
new file mode 100644
index 0000000000..ffc522b1da
--- /dev/null
+++ b/var/spack/packages/petsc/package.py
@@ -0,0 +1,35 @@
+from spack import *
+
+class Petsc(Package):
+ """PETSc is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations."""
+
+ homepage = "http://www.mcs.anl.gov/petsc/index.html"
+ url = "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-3.5.3.tar.gz"
+
+ version('3.5.3', 'd4fd2734661e89f18ac6014b5dd1ef2f')
+ version('3.5.2', 'ad170802b3b058b5deb9cd1f968e7e13')
+ version('3.5.1', 'a557e029711ebf425544e117ffa44d8f')
+
+ depends_on("blas")
+ depends_on("lapack")
+ depends_on("hypre")
+ depends_on("parmetis")
+ depends_on("metis")
+ depends_on("hdf5")
+
+ def install(self, spec, prefix):
+ configure("--prefix=%s" % prefix,
+ "--with-blas-lib=%s/lib/libblas.a" % spec['blas'].prefix,
+ "--with-lapack-lib=%s/lib/liblapack.a" % spec['lapack'].prefix,
+ "--with-hypre-lib=%s/lib/libhypre.a" % spec['hypre'].prefix,
+ "--with-hypre-include=%s/include" % spec['hypre'].prefix,
+ "--with-parmetis-lib=%s/lib/libparmetis.a" % spec['parmetis'].prefix,
+ "--with-parmetis-include=%s/include" % spec['parmetis'].prefix,
+ "--with-metis-lib=%s/lib/libmetis.a" % spec['metis'].prefix,
+ "--with-metis-include=%s/include" % spec['metis'].prefix,
+ "--with-hdf5-lib=%s/lib/libhdf5.a" % spec['hdf5'].prefix,
+ "--with-hdf5-include=%s/include" % spec['hdf5'].prefix,
+ "--with-shared-libraries=0")
+
+ make()
+ make("install")
diff --git a/var/spack/packages/zoltan_distrib/package.py b/var/spack/packages/zoltan_distrib/package.py
new file mode 100644
index 0000000000..85f32f0a2d
--- /dev/null
+++ b/var/spack/packages/zoltan_distrib/package.py
@@ -0,0 +1,33 @@
+# FIXME:
+# This is a template package file for Spack. We've conveniently
+# put "FIXME" labels next to all the things you'll want to change.
+#
+# Once you've edited all the FIXME's, delete this whole message,
+# save this file, and test out your package like this:
+#
+# spack install zoltan_distrib
+#
+# You can always get back here to change things with:
+#
+# spack edit zoltan_distrib
+#
+# See the spack documentation for more information on building
+# packages.
+#
+from spack import *
+
+class ZoltanDistrib(Package):
+ """FIXME: put a proper description of your package here."""
+
+ homepage = "http://www.example.com"
+ url = "http://www.cs.sandia.gov/~kddevin/Zoltan_Distributions/zoltan_distrib_v3.81.tar.gz"
+
+ version('3.81', 'e0587ac69dbc3b17d28f515ed0933719')
+
+ def install(self, spec, prefix):
+ # FIXME: Modify the configure line to suit your build system here.
+ configure("--prefix=%s" % prefix)
+
+ # FIXME: Add logic to build and install here
+ make()
+ make("install")
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2025-03-01 12:51:23 +0000