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-rw-r--r--var/spack/repos/builtin/packages/py-cnvkit/package.py4
1 files changed, 3 insertions, 1 deletions
diff --git a/var/spack/repos/builtin/packages/py-cnvkit/package.py b/var/spack/repos/builtin/packages/py-cnvkit/package.py
index ed5313f2db..045c940206 100644
--- a/var/spack/repos/builtin/packages/py-cnvkit/package.py
+++ b/var/spack/repos/builtin/packages/py-cnvkit/package.py
@@ -41,6 +41,8 @@ class PyCnvkit(PythonPackage):
depends_on('py-numpy@1.9:', type=('build', 'run'))
depends_on('py-pandas@0.18.1:', type=('build', 'run'))
depends_on('py-pyfaidx@0.4.7:', type=('build', 'run'))
- depends_on('py-pysam@0.10.0:', type=('build', 'run'))
+ depends_on('py-pysam@0.10.0:0.13', type=('build', 'run'))
depends_on('py-reportlab@3.0:', type=('build', 'run'))
depends_on('py-scipy@0.15.0:', type=('build', 'run'))
+ depends_on('bcftools@1.6', type=('build', 'run'))
+ depends_on('samtools@1.6', type=('build', 'run'))