diff options
| -rw-r--r-- | var/spack/repos/builtin/packages/primer3/package.py | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/primer3/package.py b/var/spack/repos/builtin/packages/primer3/package.py new file mode 100644 index 0000000000..fbed680b33 --- /dev/null +++ b/var/spack/repos/builtin/packages/primer3/package.py @@ -0,0 +1,46 @@ +############################################################################## +# Copyright (c) 2013-2016, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Primer3(MakefilePackage): + """Primer3 is a widely used program for designing PCR primers + (PCR = "Polymerase Chain Reaction"). PCR is an essential and + ubiquitous tool in genetics and molecular biology. Primer3 + can also design hybridization probes and sequencing primers.""" + + homepage = "http://primer3.sourceforge.net/" + url = "https://sourceforge.net/projects/primer3/files/primer3/2.3.7/primer3-2.3.7.tar.gz/download" + + version('2.3.7', 'c6b89067bf465e62b6b1fd830b5b4418') + + build_directory = 'src' + + def install(self, spec, prefix): + with working_dir(self.build_directory): + mkdirp(prefix.bin) + for binary in ('primer3_core', 'ntdpal', 'oligotm', + 'long_seq_tm_test'): + install(binary, prefix.bin) |