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| -rw-r--r-- | var/spack/repos/builtin/packages/py-rnacocktail/package.py | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-rnacocktail/package.py b/var/spack/repos/builtin/packages/py-rnacocktail/package.py new file mode 100644 index 0000000000..e2ef86a1f3 --- /dev/null +++ b/var/spack/repos/builtin/packages/py-rnacocktail/package.py @@ -0,0 +1,25 @@ +# Copyright 2013-2019 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyRnacocktail(PythonPackage): + """RNACocktail: A comprehensive framework + for accurate and efficient RNA-Seq analysis.""" + + homepage = "http://bioinform.github.io/rnacocktail/" + url = "https://github.com/bioinform/rnacocktail/archive/v0.2.2.tar.gz" + + version('0.2.2', sha256='34aa0d1d7bd9d80303fe7dac5acc0519f7c1ed986397692588343d82ce45c7a5') + + depends_on('python@2.7:2.8', type=('build', 'run')) + depends_on('py-setuptools', type='build') + depends_on('py-pybedtools', type=('build', 'run')) + depends_on('py-pysam', type=('build', 'run')) + # Higher version of py-pandas and py-numpy + # depends on python@3: which conflicts with py-rnacocktail + depends_on('py-pandas@:0.24.2', type=('build', 'run')) + depends_on('py-numpy@:1.16.5', type=('build', 'run')) |