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-rw-r--r--var/spack/packages/cgal/package.py73
-rw-r--r--var/spack/packages/gdb/package.py12
-rw-r--r--var/spack/packages/git/package.py16
-rw-r--r--var/spack/packages/gperftools/package.py3
-rw-r--r--var/spack/packages/julia/gc.patch11
-rw-r--r--var/spack/packages/julia/package.py5
-rw-r--r--var/spack/packages/metis/package.py1
-rw-r--r--var/spack/packages/patchelf/package.py16
-rw-r--r--var/spack/packages/petsc/package.py4
-rw-r--r--var/spack/packages/python/package.py13
-rw-r--r--var/spack/packages/szip/package.py21
-rw-r--r--var/spack/packages/texinfo/package.py10
-rw-r--r--var/spack/packages/wget/package.py5
13 files changed, 159 insertions, 31 deletions
diff --git a/var/spack/packages/cgal/package.py b/var/spack/packages/cgal/package.py
new file mode 100644
index 0000000000..97356433be
--- /dev/null
+++ b/var/spack/packages/cgal/package.py
@@ -0,0 +1,73 @@
+##############################################################################
+# Copyright (c) 2013, Lawrence Livermore National Security, LLC.
+# Produced at the Lawrence Livermore National Laboratory.
+#
+# This file is part of Spack.
+# Written by Todd Gamblin, tgamblin@llnl.gov, All rights reserved.
+# LLNL-CODE-647188
+#
+# For details, see https://github.com/llnl/spack
+# Please also see the LICENSE file for our notice and the LGPL.
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License (as published by
+# the Free Software Foundation) version 2.1 dated February 1999.
+#
+# This program is distributed in the hope that it will be useful, but
+# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and
+# conditions of the GNU General Public License for more details.
+#
+# You should have received a copy of the GNU Lesser General Public License
+# along with this program; if not, write to the Free Software Foundation,
+# Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
+##############################################################################
+
+from spack import *
+
+
+class Cgal(Package):
+ """
+ CGAL is a software project that provides easy access to efficient and reliable geometric algorithms in the form of
+ a C++ library. CGAL is used in various areas needing geometric computation, such as geographic information systems,
+ computer aided design, molecular biology, medical imaging, computer graphics, and robotics.
+ """
+ homepage = 'http://www.cgal.org/'
+ url = 'https://github.com/CGAL/cgal/archive/releases/CGAL-4.7.tar.gz'
+
+ version('4.7', '4826714810f3b4c65cac96b90fb03b67')
+ version('4.6.3', 'e8ee2ecc8d2b09b94a121c09257b576d')
+
+ # Installation instructions : http://doc.cgal.org/latest/Manual/installation.html
+ variant('shared', default=True, description='Enables the build of shared libraries')
+ variant('debug', default=False, description='Builds a debug version of the libraries')
+
+ depends_on('boost')
+ depends_on('mpfr')
+ depends_on('gmp')
+ depends_on('zlib')
+
+ # FIXME : Qt5 dependency missing (needs Qt5 and OpenGL)
+ # FIXME : Optional third party libraries missing
+
+ def install(self, spec, prefix):
+
+ options = []
+ options.extend(std_cmake_args)
+ # CGAL supports only Release and Debug build type. Any other build type will raise an error at configure time
+ if '+debug' in spec:
+ options.append('-DCMAKE_BUILD_TYPE:STRING=Debug')
+ else:
+ options.append('-DCMAKE_BUILD_TYPE:STRING=Release')
+
+ if '+shared' in spec:
+ options.append('-DBUILD_SHARED_LIBS:BOOL=ON')
+ else:
+ options.append('-DBUILD_SHARED_LIBS:BOOL=OFF')
+
+ build_directory = join_path(self.stage.path, 'spack-build')
+ source_directory = self.stage.source_path
+ with working_dir(build_directory, create=True):
+ cmake(source_directory, *options)
+ make()
+ make("install")
diff --git a/var/spack/packages/gdb/package.py b/var/spack/packages/gdb/package.py
index fd567f346b..85ed3215e2 100644
--- a/var/spack/packages/gdb/package.py
+++ b/var/spack/packages/gdb/package.py
@@ -32,13 +32,13 @@ class Gdb(Package):
-- or what another program was doing at the moment it crashed.
"""
homepage = "https://www.gnu.org/software/gdb"
- url = "http://ftp.gnu.org/gnu/gdb/gdb-7.10.tar.xz"
+ url = "http://ftp.gnu.org/gnu/gdb/gdb-7.10.tar.gz"
- version('7.10.1', '39e654460c9cdd80200a29ac020cfe11')
- version('7.10', '2a35bac41fa8e10bf04f3a0dd7f7f363')
- version('7.9.1', '35374c77a70884eb430c97061053a36e')
- version('7.9', 'e6279f26559d839f0b4218a482bcb43e')
- version('7.8.2', 'a80cf252ed2e775d4e4533341bbf2459')
+ version('7.10.1', 'b93a2721393e5fa226375b42d567d90b')
+ version('7.10', 'fa6827ad0fd2be1daa418abb11a54d86')
+ version('7.9.1', 'f3b97de919a9dba84490b2e076ec4cb0')
+ version('7.9', '8f8ced422fe462a00e0135a643544f17')
+ version('7.8.2', '8b0ea8b3559d3d90b3ff4952f0aeafbc')
depends_on('texinfo')
diff --git a/var/spack/packages/git/package.py b/var/spack/packages/git/package.py
index 28c7aa8161..ddc5078c4d 100644
--- a/var/spack/packages/git/package.py
+++ b/var/spack/packages/git/package.py
@@ -5,14 +5,14 @@ class Git(Package):
system designed to handle everything from small to very large
projects with speed and efficiency."""
homepage = "http://git-scm.com"
- url = "https://www.kernel.org/pub/software/scm/git/git-2.2.1.tar.xz"
-
- version('2.6.3', '5a6375349c3f13c8dbbabfc327bae429')
- version('2.6.2', '32ae5ad29763fc927bfcaeab55385fd9')
- version('2.6.1', 'dd4a3a7fe96598c553edd39d40c9c290')
- version('2.6.0', '6b7d43d615fb3f0dfecf4d131e23f438')
- version('2.5.4', 'ec118fcd1cf984edc17eb6588b78e81b')
- version('2.2.1', '43e01f9d96ba8c11611e0eef0d9f9f28')
+ url = "https://www.kernel.org/pub/software/scm/git/git-2.2.1.tar.gz"
+
+ version('2.6.3', 'b711be7628a4a2c25f38d859ee81b423')
+ version('2.6.2', 'da293290da69f45a86a311ad3cd43dc8')
+ version('2.6.1', '4c62ee9c5991fe93d99cf2a6b68397fd')
+ version('2.6.0', 'eb76a07148d94802a1745d759716a57e')
+ version('2.5.4', '3eca2390cf1fa698b48e2a233563a76b')
+ version('2.2.1', 'ff41fdb094eed1ec430aed8ee9b9849c')
# Git compiles with curl support by default on but if your system
diff --git a/var/spack/packages/gperftools/package.py b/var/spack/packages/gperftools/package.py
index 0ba44c9329..22b2e6c424 100644
--- a/var/spack/packages/gperftools/package.py
+++ b/var/spack/packages/gperftools/package.py
@@ -30,8 +30,11 @@ class Gperftools(Package):
homepage = "https://code.google.com/p/gperftools"
url = "https://googledrive.com/host/0B6NtGsLhIcf7MWxMMF9JdTN3UVk/gperftools-2.3.tar.gz"
+ version('2.4', '2171cea3bbe053036fb5d5d25176a160', url="https://github.com/gperftools/gperftools/releases/download/gperftools-2.4/gperftools-2.4.tar.gz")
version('2.3', 'f54dd119f0e46ac1f13264f8d97adf90', url="https://googledrive.com/host/0B6NtGsLhIcf7MWxMMF9JdTN3UVk/gperftools-2.3.tar.gz")
+ depends_on("libunwind")
+
def install(self, spec, prefix):
configure("--prefix=" + prefix)
make()
diff --git a/var/spack/packages/julia/gc.patch b/var/spack/packages/julia/gc.patch
new file mode 100644
index 0000000000..6db69c6c1b
--- /dev/null
+++ b/var/spack/packages/julia/gc.patch
@@ -0,0 +1,11 @@
+--- julia/src/gc.c
++++ julia/src/gc.c
+@@ -162,7 +162,7 @@
+ // A region is contiguous storage for up to REGION_PG_COUNT naturally aligned GC_PAGE_SZ pages
+ // It uses a very naive allocator (see malloc_page & free_page)
+ #if defined(_P64) && !defined(_COMPILER_MICROSOFT_)
+-#define REGION_PG_COUNT 16*8*4096 // 8G because virtual memory is cheap
++#define REGION_PG_COUNT 8*4096 // 512M
+ #else
+ #define REGION_PG_COUNT 8*4096 // 512M
+ #endif
diff --git a/var/spack/packages/julia/package.py b/var/spack/packages/julia/package.py
index 9fd946c905..d978842d9c 100644
--- a/var/spack/packages/julia/package.py
+++ b/var/spack/packages/julia/package.py
@@ -8,11 +8,14 @@ class Julia(Package):
version('0.4.2', 'ccfeb4f4090c8b31083f5e1ccb03eb06')
+ patch('gc.patch')
+
# Build-time dependencies
- # depends_on("cmake")
+ depends_on("cmake @2.8:")
# depends_on("awk")
# depends_on("m4")
# depends_on("pkg-config")
+ depends_on("python @2.6:2.9")
# I think that Julia requires the dependencies above, but it builds find (on
# my system) without these. We should enable them as necessary.
diff --git a/var/spack/packages/metis/package.py b/var/spack/packages/metis/package.py
index 7ce5ae1925..9d6d7fefe1 100644
--- a/var/spack/packages/metis/package.py
+++ b/var/spack/packages/metis/package.py
@@ -12,6 +12,7 @@ class Metis(Package):
version('5.1.0', '5465e67079419a69e0116de24fce58fe')
+ depends_on("cmake @2.8:") # build-time dependency
depends_on('mpi')
def install(self, spec, prefix):
diff --git a/var/spack/packages/patchelf/package.py b/var/spack/packages/patchelf/package.py
new file mode 100644
index 0000000000..036dc6bd17
--- /dev/null
+++ b/var/spack/packages/patchelf/package.py
@@ -0,0 +1,16 @@
+from spack import *
+
+class Patchelf(Package):
+ """PatchELF is a small utility to modify the dynamic linker and RPATH of ELF executables."""
+
+ homepage = "https://nixos.org/patchelf.html"
+ url = "http://nixos.org/releases/patchelf/patchelf-0.8/patchelf-0.8.tar.gz"
+ list_url = "http://nixos.org/releases/patchelf/"
+ list_depth = 2
+
+ version('0.8', '407b229e6a681ffb0e2cdd5915cb2d01')
+
+ def install(self, spec, prefix):
+ configure('--prefix=%s' % prefix)
+ make()
+ make("install")
diff --git a/var/spack/packages/petsc/package.py b/var/spack/packages/petsc/package.py
index 50533dbe54..dc4d6bb412 100644
--- a/var/spack/packages/petsc/package.py
+++ b/var/spack/packages/petsc/package.py
@@ -25,9 +25,6 @@ class Petsc(Package):
def install(self, spec, prefix):
configure("--prefix=%s" % prefix,
- "CC=cc",
- "CXX=c++",
- "FC=f90",
"--with-blas-lib=%s/libblas.a" % spec['blas'].prefix.lib,
"--with-lapack-lib=%s/liblapack.a" % spec['lapack'].prefix.lib,
"--with-boost-dir=%s" % spec['boost'].prefix,
@@ -35,6 +32,7 @@ class Petsc(Package):
"--with-parmetis-dir=%s" % spec['parmetis'].prefix,
"--with-metis-dir=%s" % spec['metis'].prefix,
"--with-hdf5-dir=%s" % spec['hdf5'].prefix,
+ "--with-mpi-dir=%s" % spec['mpi'].prefix,
"--with-shared-libraries=0")
# PETSc has its own way of doing parallel make.
diff --git a/var/spack/packages/python/package.py b/var/spack/packages/python/package.py
index eae2566b57..a1ce06feb0 100644
--- a/var/spack/packages/python/package.py
+++ b/var/spack/packages/python/package.py
@@ -11,15 +11,16 @@ import spack
class Python(Package):
"""The Python programming language."""
homepage = "http://www.python.org"
- url = "http://www.python.org/ftp/python/2.7.8/Python-2.7.8.tar.xz"
+ url = "http://www.python.org/ftp/python/2.7.8/Python-2.7.8.tgz"
extendable = True
- version('2.7.8', 'd235bdfa75b8396942e360a70487ee00')
- version('2.7.10', 'c685ef0b8e9f27b5e3db5db12b268ac6')
- version('2.7.11', '1dbcc848b4cd8399a8199d000f9f823c', preferred=True)
- version('3.5.0', 'd149d2812f10cbe04c042232e7964171')
- version('3.5.1', 'e9ea6f2623fffcdd871b7b19113fde80')
+ version('3.5.1', 'be78e48cdfc1a7ad90efff146dce6cfe')
+ version('3.5.0', 'a56c0c0b45d75a0ec9c6dee933c41c36')
+ version('2.7.11', '6b6076ec9e93f05dd63e47eb9c15728b', preferred=True)
+ version('2.7.10', 'd7547558fd673bd9d38e2108c6b42521')
+ version('2.7.9', '5eebcaa0030dc4061156d3429657fb83')
+ version('2.7.8', 'd4bca0159acb0b44a781292b5231936f')
depends_on("openssl")
depends_on("bzip2")
diff --git a/var/spack/packages/szip/package.py b/var/spack/packages/szip/package.py
new file mode 100644
index 0000000000..c48c5b431e
--- /dev/null
+++ b/var/spack/packages/szip/package.py
@@ -0,0 +1,21 @@
+from spack import *
+
+class Szip(Package):
+ """Szip is an implementation of the extended-Rice lossless compression algorithm.
+ It provides lossless compression of scientific data, and is provided with HDF
+ software products."""
+
+ homepage = "https://www.hdfgroup.org/doc_resource/SZIP/"
+ url = "http://www.hdfgroup.org/ftp/lib-external/szip/2.1/src/szip-2.1.tar.gz"
+
+ version('2.1', '902f831bcefb69c6b635374424acbead')
+
+ def install(self, spec, prefix):
+ configure('--prefix=%s' % prefix,
+ '--enable-production',
+ '--enable-shared',
+ '--enable-static',
+ '--enable-encoding')
+
+ make()
+ make("install")
diff --git a/var/spack/packages/texinfo/package.py b/var/spack/packages/texinfo/package.py
index 460db65b3e..1b22c72e72 100644
--- a/var/spack/packages/texinfo/package.py
+++ b/var/spack/packages/texinfo/package.py
@@ -33,12 +33,12 @@ class Texinfo(Package):
used by many non-GNU projects as well.FIXME: put a proper description of your package here.
"""
homepage = "https://www.gnu.org/software/texinfo/"
- url = "http://ftp.gnu.org/gnu/texinfo/texinfo-6.0.tar.xz"
+ url = "http://ftp.gnu.org/gnu/texinfo/texinfo-6.0.tar.gz"
- version('6.0', '02818e62a5b8ae0213a7ff572991bb50')
- version('5.2', 'cb489df8a7ee9d10a236197aefdb32c5')
- version('5.1', '52ee905a3b705020d2a1b6ec36d53ca6')
- version('5.0', 'ef2fad34c71ddc95b20c7d6a08c0d7a6')
+ version('6.0', 'e1a2ef5dce5018b53f0f6eed45b247a7')
+ version('5.2', '1b8f98b80a8e6c50422125e07522e8db')
+ version('5.1', '54e250014fe698fb4832016158747c03')
+ version('5.0', '918432285abe6fe96c98355594c5656a')
def install(self, spec, prefix):
configure('--prefix=%s' % prefix)
diff --git a/var/spack/packages/wget/package.py b/var/spack/packages/wget/package.py
index c8fd025122..55728b0515 100644
--- a/var/spack/packages/wget/package.py
+++ b/var/spack/packages/wget/package.py
@@ -8,9 +8,10 @@ class Wget(Package):
etc."""
homepage = "http://www.gnu.org/software/wget/"
- url = "http://ftp.gnu.org/gnu/wget/wget-1.16.tar.xz"
+ url = "http://ftp.gnu.org/gnu/wget/wget-1.16.tar.gz"
- version('1.16', 'fe102975ab3a6c049777883f1bb9ad07')
+ version('1.17', 'c4c4727766f24ac716936275014a0536')
+ version('1.16', '293a37977c41b5522f781d3a3a078426')
depends_on("openssl")
generated by cgit v1.2.3-70-g09d2 (git 2.46.0) at 2024-11-06 06:44:03 +0000