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| -rw-r--r-- | var/spack/repos/builtin/packages/py-mxfold2/package.py | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/py-mxfold2/package.py b/var/spack/repos/builtin/packages/py-mxfold2/package.py new file mode 100644 index 0000000000..c6838a97dc --- /dev/null +++ b/var/spack/repos/builtin/packages/py-mxfold2/package.py @@ -0,0 +1,26 @@ +# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class PyMxfold2(PythonPackage): + """MXfold2: RNA secondary structure prediction using deep + learning with thermodynamic integration""" + + homepage = "https://github.com/keio-bioinformatics/mxfold2" + url = "https://github.com/keio-bioinformatics/mxfold2/releases/download/v0.1.1/mxfold2-0.1.1.tar.gz" + + maintainers = ['dorton21'] + + version('0.1.1', sha256='9f39c6ff4138212d1ad2639005f5c05ffb4df0f7e22f5e7ad49466a05aa047e5') + + depends_on('python@3.7:', type=('build', 'run')) + depends_on('py-torch@1.7:~valgrind', type=('build', 'run')) + depends_on('py-torchvision', type=('build', 'run')) + depends_on('py-wheel@0.35.1:0.36.0', type=('build', 'run')) + depends_on('py-setuptools', type='build') + depends_on('py-setuptools-cpp', type='build') + depends_on('cmake', type='build') |