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-rw-r--r--etc/spack/modules.yaml8
-rw-r--r--lib/spack/spack/config.py28
-rw-r--r--lib/spack/spack/modules.py5
-rw-r--r--var/spack/repos/builtin/packages/cmake/package.py7
-rw-r--r--var/spack/repos/builtin/packages/mumps/package.py3
-rw-r--r--var/spack/repos/builtin/packages/openblas/package.py10
-rw-r--r--var/spack/repos/builtin/packages/parmetis/link-to-lm.patch14
-rw-r--r--var/spack/repos/builtin/packages/parmetis/package.py2
8 files changed, 69 insertions, 8 deletions
diff --git a/etc/spack/modules.yaml b/etc/spack/modules.yaml
new file mode 100644
index 0000000000..aa2a2c3fe2
--- /dev/null
+++ b/etc/spack/modules.yaml
@@ -0,0 +1,8 @@
+# -------------------------------------------------------------------------
+# This is the default spack module files generation configuration.
+#
+# Changes to this file will affect all users of this spack install,
+# although users can override these settings in their ~/.spack/modules.yaml.
+# -------------------------------------------------------------------------
+modules:
+ enable: ['tcl', 'dotkit']
diff --git a/lib/spack/spack/config.py b/lib/spack/spack/config.py
index 6afd69b3ac..14e5aaf4fb 100644
--- a/lib/spack/spack/config.py
+++ b/lib/spack/spack/config.py
@@ -237,7 +237,29 @@ section_schemas = {
'type' : 'object',
'default' : {},
}
- },},},},},}
+ },},},},},},
+ 'modules': {
+ '$schema': 'http://json-schema.org/schema#',
+ 'title': 'Spack module file configuration file schema',
+ 'type': 'object',
+ 'additionalProperties': False,
+ 'patternProperties': {
+ r'modules:?': {
+ 'type': 'object',
+ 'default': {},
+ 'additionalProperties': False,
+ 'properties': {
+ 'enable': {
+ 'type': 'array',
+ 'default': [],
+ 'items': {
+ 'type': 'string'
+ }
+ }
+ }
+ },
+ },
+ },
}
"""OrderedDict of config scopes keyed by name.
@@ -405,11 +427,11 @@ def _read_config_file(filename, schema):
validate_section(data, schema)
return data
- except MarkedYAMLError, e:
+ except MarkedYAMLError as e:
raise ConfigFileError(
"Error parsing yaml%s: %s" % (str(e.context_mark), e.problem))
- except IOError, e:
+ except IOError as e:
raise ConfigFileError(
"Error reading configuration file %s: %s" % (filename, str(e)))
diff --git a/lib/spack/spack/modules.py b/lib/spack/spack/modules.py
index 8ed98e5d38..6c32937c3c 100644
--- a/lib/spack/spack/modules.py
+++ b/lib/spack/spack/modules.py
@@ -48,6 +48,7 @@ import textwrap
import llnl.util.tty as tty
import spack
+import spack.config
from llnl.util.filesystem import join_path, mkdirp
from spack.environment import *
@@ -56,6 +57,8 @@ __all__ = ['EnvModule', 'Dotkit', 'TclModule']
# Registry of all types of modules. Entries created by EnvModule's metaclass
module_types = {}
+CONFIGURATION = spack.config.get_config('modules')
+
def print_help():
"""For use by commands to tell user how to activate shell support."""
@@ -115,7 +118,7 @@ class EnvModule(object):
class __metaclass__(type):
def __init__(cls, name, bases, dict):
type.__init__(cls, name, bases, dict)
- if cls.name != 'env_module':
+ if cls.name != 'env_module' and cls.name in CONFIGURATION['enable']:
module_types[cls.name] = cls
def __init__(self, spec=None):
diff --git a/var/spack/repos/builtin/packages/cmake/package.py b/var/spack/repos/builtin/packages/cmake/package.py
index cc93c7067c..1f93d39769 100644
--- a/var/spack/repos/builtin/packages/cmake/package.py
+++ b/var/spack/repos/builtin/packages/cmake/package.py
@@ -38,10 +38,12 @@ class Cmake(Package):
version('2.8.10.2', '097278785da7182ec0aea8769d06860c')
variant('ncurses', default=True, description='Enables the build of the ncurses gui')
+ variant('openssl', default=True, description="Enables CMake's OpenSSL features")
variant('qt', default=False, description='Enables the build of cmake-gui')
variant('doc', default=False, description='Enables the generation of html and man page documentation')
depends_on('ncurses', when='+ncurses')
+ depends_on('openssl', when='+openssl')
depends_on('qt', when='+qt')
depends_on('python@2.7.11:', when='+doc')
depends_on('py-sphinx', when='+doc')
@@ -77,8 +79,9 @@ class Cmake(Package):
options.append('--sphinx-html')
options.append('--sphinx-man')
- options.append('--')
- options.append('-DCMAKE_USE_OPENSSL=ON')
+ if '+openssl' in spec:
+ options.append('--')
+ options.append('-DCMAKE_USE_OPENSSL=ON')
configure(*options)
make()
diff --git a/var/spack/repos/builtin/packages/mumps/package.py b/var/spack/repos/builtin/packages/mumps/package.py
index 5c120c37df..5a254dfd00 100644
--- a/var/spack/repos/builtin/packages/mumps/package.py
+++ b/var/spack/repos/builtin/packages/mumps/package.py
@@ -135,7 +135,8 @@ class Mumps(Package):
self.write_makefile_inc()
- make(*make_libs)
+ # Build fails in parallel, at least on OS-X
+ make(*make_libs, parallel=False)
install_tree('lib', prefix.lib)
install_tree('include', prefix.include)
diff --git a/var/spack/repos/builtin/packages/openblas/package.py b/var/spack/repos/builtin/packages/openblas/package.py
index 781a1e2ec8..1d10f217c4 100644
--- a/var/spack/repos/builtin/packages/openblas/package.py
+++ b/var/spack/repos/builtin/packages/openblas/package.py
@@ -6,6 +6,7 @@ class Openblas(Package):
homepage = "http://www.openblas.net"
url = "http://github.com/xianyi/OpenBLAS/archive/v0.2.15.tar.gz"
+ version('0.2.17', '664a12807f2a2a7cda4781e3ab2ae0e1')
version('0.2.16', 'fef46ab92463bdbb1479dcec594ef6dc')
version('0.2.15', 'b1190f3d3471685f17cfd1ec1d252ac9')
@@ -14,7 +15,14 @@ class Openblas(Package):
provides('lapack')
def install(self, spec, prefix):
- make('libs', 'netlib', 'shared', 'CC=cc', 'FC=f77')
+ extra=[]
+ if spec.satisfies('@0.2.16'):
+ extra.extend([
+ 'BUILD_LAPACK_DEPRECATED=1' # fix missing _dggsvd_ and _sggsvd_
+ ])
+
+ make('libs', 'netlib', 'shared', 'CC=cc', 'FC=f77',*extra)
+ make("tests")
make('install', "PREFIX='%s'" % prefix)
lib_dsuffix = 'dylib' if sys.platform == 'darwin' else 'so'
diff --git a/var/spack/repos/builtin/packages/parmetis/link-to-lm.patch b/var/spack/repos/builtin/packages/parmetis/link-to-lm.patch
new file mode 100644
index 0000000000..faa809231e
--- /dev/null
+++ b/var/spack/repos/builtin/packages/parmetis/link-to-lm.patch
@@ -0,0 +1,14 @@
+diff --git a/libparmetis/CMakeLists.txt b/libparmetis/CMakeLists.txt
+index 9cfc8a7..dfc0125 100644
+--- a/libparmetis/CMakeLists.txt
++++ b/libparmetis/CMakeLists.txt
+@@ -5,7 +5,7 @@ file(GLOB parmetis_sources *.c)
+ # Create libparmetis
+ add_library(parmetis ${ParMETIS_LIBRARY_TYPE} ${parmetis_sources})
+ # Link with metis and MPI libraries.
+-target_link_libraries(parmetis metis ${MPI_LIBRARIES})
++target_link_libraries(parmetis metis ${MPI_LIBRARIES} "-lm")
+ set_target_properties(parmetis PROPERTIES LINK_FLAGS "${MPI_LINK_FLAGS}")
+
+ install(TARGETS parmetis
+
diff --git a/var/spack/repos/builtin/packages/parmetis/package.py b/var/spack/repos/builtin/packages/parmetis/package.py
index c691cf4191..bc71fb7299 100644
--- a/var/spack/repos/builtin/packages/parmetis/package.py
+++ b/var/spack/repos/builtin/packages/parmetis/package.py
@@ -52,6 +52,8 @@ class Parmetis(Package):
# https://bitbucket.org/petsc/pkg-parmetis/commits/82409d68aa1d6cbc70740d0f35024aae17f7d5cb/raw/
patch('pkg-parmetis-82409d68aa1d6cbc70740d0f35024aae17f7d5cb.patch')
+ patch('link-to-lm.patch')
+
depends_on('gdb', when='+gdb')
def install(self, spec, prefix):