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-rw-r--r--var/spack/repos/builtin/packages/meme/package.py45
1 files changed, 24 insertions, 21 deletions
diff --git a/var/spack/repos/builtin/packages/meme/package.py b/var/spack/repos/builtin/packages/meme/package.py
index c73a0a43b8..3ebe9739b0 100644
--- a/var/spack/repos/builtin/packages/meme/package.py
+++ b/var/spack/repos/builtin/packages/meme/package.py
@@ -15,6 +15,7 @@ class Meme(AutotoolsPackage):
homepage = "https://meme-suite.org"
url = "http://meme-suite.org/meme-software/5.1.1/meme-5.1.1.tar.gz"
+ version("5.5.4", sha256="cda6011c2b855bf2563c4e7a2c255e11e99b5b6e5e73736ff008942507580153")
version("5.3.0", sha256="b2ddec9db972fcf77b29c7deb62df8b1dd8a6638c13c1aa06a5d563c4a7ff756")
version("5.2.0", sha256="0cbf8c2172e9b6c07855b8aeec457f4825f0b132f8cbb11192880e2f6033f54f")
version("5.1.1", sha256="38d73d256d431ad4eb7da2c817ce56ff2b4e26c39387ff0d6ada088938b38eb5")
@@ -22,35 +23,37 @@ class Meme(AutotoolsPackage):
version("4.11.4", sha256="3e869ff57e327a9c8615dbef784e3f1095f7f7a0120cecd55efe10c3f2ee8eb3")
variant("mpi", default=True, description="Enable MPI support")
- variant("image-magick", default=False, description="Enable image-magick for png output")
+ variant("magick", default=False, description="Enable imagemagick for png output")
- depends_on("zlib-api", type=("link"))
- depends_on("libgcrypt", type=("link"))
- depends_on("perl", type=("build", "run"))
- depends_on("python@2.7:", type=("build", "run"))
- depends_on("mpi", when="+mpi")
- depends_on("imagemagick", type=("build", "run"), when="+image-magick")
+ # Perl runtime deps
+ depends_on("perl@5.16:", type=("build", "run"))
depends_on("perl-xml-parser", type=("build", "run"))
- depends_on("perl-xml-simple", when="@4.5.0:")
- depends_on("libxml2", type=("build", "run"))
- depends_on("libxslt", type=("build", "run"))
+ depends_on("perl-xml-simple", type=("build", "run"))
+ # Python runtime deps
+ depends_on("python", type=("build", "run"))
+ # Build deps
+ depends_on("zlib-ng")
+ depends_on("ghostscript")
+ depends_on("libxml2")
+ depends_on("libxslt")
+ # Variant deps
+ depends_on("imagemagick", type=("build", "run"), when="+magick")
+ depends_on("mpi", when="+mpi")
patch("arm.patch", when="%arm")
+ def patch(self):
+ # Remove flags not recognized by the NVIDIA compiler
+ if self.spec.satisfies("%nvhpc"):
+ filter_file("-fno-common", "", "configure")
+ filter_file("-Wno-unused", "", "configure")
+
def url_for_version(self, version):
url = "http://meme-suite.org/meme-software/{0}/meme{1}{2}.tar.gz"
sep = "-" if version >= Version("5.0.2") else "_"
return url.format(version.up_to(3), sep, version)
def configure_args(self):
- spec = self.spec
- args = []
- if "~mpi" in spec:
- args += ["--enable-serial"]
- return args
-
- def patch(self):
- # Remove flags not recognized by the NVIDIA compiler
- if self.spec.satisfies("%nvhpc"):
- filter_file("-fno-common", "", "configure")
- filter_file("-Wno-unused", "", "configure")
+ if "~mpi" in self.spec:
+ return ["--enable-serial"]
+ return []