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Diffstat (limited to 'lib/spack/docs/tutorial/examples/Makefile/1.package.py')
| -rw-r--r-- | lib/spack/docs/tutorial/examples/Makefile/1.package.py | 46 |
1 files changed, 46 insertions, 0 deletions
diff --git a/lib/spack/docs/tutorial/examples/Makefile/1.package.py b/lib/spack/docs/tutorial/examples/Makefile/1.package.py new file mode 100644 index 0000000000..709bc71afa --- /dev/null +++ b/lib/spack/docs/tutorial/examples/Makefile/1.package.py @@ -0,0 +1,46 @@ +############################################################################## +# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. +# Produced at the Lawrence Livermore National Laboratory. +# +# This file is part of Spack. +# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. +# LLNL-CODE-647188 +# +# For details, see https://github.com/llnl/spack +# Please also see the NOTICE and LICENSE files for our notice and the LGPL. +# +# This program is free software; you can redistribute it and/or modify +# it under the terms of the GNU Lesser General Public License (as +# published by the Free Software Foundation) version 2.1, February 1999. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and +# conditions of the GNU Lesser General Public License for more details. +# +# You should have received a copy of the GNU Lesser General Public +# License along with this program; if not, write to the Free Software +# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA +############################################################################## +from spack import * + + +class Bowtie(MakefilePackage): + """Bowtie is an ultrafast, memory efficient short read aligner + for short DNA sequences (reads) from next-gen sequencers.""" + + homepage = "https://sourceforge.net/projects/bowtie-bio/" + url = "https://downloads.sourceforge.net/project/bowtie-bio/bowtie/1.2.1.1/bowtie-1.2.1.1-src.zip" + + version('1.2.1.1', 'ec06265730c5f587cd58bcfef6697ddf') + + variant("tbb", default=False, description="Use Intel thread building block") + + depends_on("tbb", when="+tbb") + + def edit(self, spec, prefix): + # FIXME: Edit the Makefile if necessary + # FIXME: If not needed delete this function + # makefile = FileFilter('Makefile') + # makefile.filter('CC = .*', 'CC = cc') + return |