diff options
Diffstat (limited to 'lib')
3 files changed, 191 insertions, 0 deletions
diff --git a/lib/spack/spack/packages/openmpi/__init__.py b/lib/spack/spack/packages/openmpi/__init__.py new file mode 100644 index 0000000000..f24a66c12e --- /dev/null +++ b/lib/spack/spack/packages/openmpi/__init__.py @@ -0,0 +1,29 @@ +from spack import * + +class Openmpi(Package): + """Open MPI is a project combining technologies and resources from + several other projects (FT-MPI, LA-MPI, LAM/MPI, and PACX-MPI) + in order to build the best MPI library available. A completely + new MPI-2 compliant implementation, Open MPI offers advantages + for system and software vendors, application developers and + computer science researchers. + """ + + homepage = "http://www.open-mpi.org" + url = "http://www.open-mpi.org/software/ompi/v1.6/downloads/openmpi-1.6.5.tar.bz2" + + versions = { '1.6.5' : '03aed2a4aa4d0b27196962a2a65fc475', } + + patch('ad_lustre_rwcontig_open_source.patch') + patch('llnl-platforms.patch') + + def install(self, spec, prefix): + configure("--prefix=%s" % prefix, + "--with-platform=contrib/platform/lanl/tlcc2/optimized-nopanasas") + + # TODO: implement variants next, so we can have LLNL and LANL options. + # use above for LANL builds, but for LLNL builds, we need this + # "--with-platform=contrib/platform/llnl/optimized") + + make() + make("install") diff --git a/lib/spack/spack/packages/openmpi/ad_lustre_rwcontig_open_source.patch b/lib/spack/spack/packages/openmpi/ad_lustre_rwcontig_open_source.patch new file mode 100644 index 0000000000..daa825ccbe --- /dev/null +++ b/lib/spack/spack/packages/openmpi/ad_lustre_rwcontig_open_source.patch @@ -0,0 +1,11 @@ +--- a/ompi/mca/io/romio/romio/adio/ad_lustre/ad_lustre_rwcontig.c 2013-12-10 12:05:44.806417000 -0800 ++++ b/ompi/mca/io/romio/romio/adio/ad_lustre/ad_lustre_rwcontig.c 2013-12-10 11:53:03.295622000 -0800 +@@ -8,7 +8,7 @@ + * Copyright (C) 2008 Sun Microsystems, Lustre group + */ + +-#define _XOPEN_SOURCE 600 ++//#define _XOPEN_SOURCE 600 + #include <stdlib.h> + #include <malloc.h> + #include "ad_lustre.h" diff --git a/lib/spack/spack/packages/openmpi/llnl-platforms.patch b/lib/spack/spack/packages/openmpi/llnl-platforms.patch new file mode 100644 index 0000000000..f515743c4d --- /dev/null +++ b/lib/spack/spack/packages/openmpi/llnl-platforms.patch @@ -0,0 +1,151 @@ +diff -Nuar openmpi-1.6.5.orig/contrib/platform/llnl/optimized openmpi-1.6.5.llnl/contrib/platform/llnl/optimized +--- openmpi-1.6.5.orig/contrib/platform/llnl/optimized 1969-12-31 16:00:00.000000000 -0800 ++++ openmpi-1.6.5.llnl/contrib/platform/llnl/optimized 2013-08-08 23:47:12.704029000 -0700 +@@ -0,0 +1,29 @@ ++enable_dlopen=no ++enable_mem_debug=no ++enable_mem_profile=no ++enable_debug_symbols=no ++enable_binaries=yes ++enable_heterogeneous=no ++enable_debug=no ++enable_shared=yes ++enable_static=yes ++enable_memchecker=no ++enable_ipv6=no ++enable_mpi_f77=yes ++enable_mpi_f90=yes ++enable_mpi_cxx=yes ++enable_mpi_cxx_seek=yes ++enable_cxx_exceptions=no ++enable_ft_thread=no ++enable_per_user_config_files=no ++enable_mca_no_build=carto,crs,filem,routed-linear,snapc,pml-dr,pml-crcp2,pml-crcpw,pml-v,pml-example,crcp,btl-tcp ++enable_contrib_no_build=libnbc,vt ++with_slurm=yes ++with_pmi=yes ++with_tm=no ++with_openib=yes ++with_psm=yes ++with_devel_headers=yes ++with_io_romio_flags=--with-file-system=ufs+nfs+lustre ++with_memory_manager=ptmalloc2 ++with_valgrind=no +diff -Nuar openmpi-1.6.5.orig/contrib/platform/llnl/optimized.conf openmpi-1.6.5.llnl/contrib/platform/llnl/optimized.conf +--- openmpi-1.6.5.orig/contrib/platform/llnl/optimized.conf 1969-12-31 16:00:00.000000000 -0800 ++++ openmpi-1.6.5.llnl/contrib/platform/llnl/optimized.conf 2013-08-08 23:43:52.907553000 -0700 +@@ -0,0 +1,114 @@ ++# ++# Copyright (c) 2004-2005 The Trustees of Indiana University and Indiana ++# University Research and Technology ++# Corporation. All rights reserved. ++# Copyright (c) 2004-2005 The University of Tennessee and The University ++# of Tennessee Research Foundation. All rights ++# reserved. ++# Copyright (c) 2004-2005 High Performance Computing Center Stuttgart, ++# University of Stuttgart. All rights reserved. ++# Copyright (c) 2004-2005 The Regents of the University of California. ++# All rights reserved. ++# Copyright (c) 2006 Cisco Systems, Inc. All rights reserved. ++# Copyright (c) 2011 Los Alamos National Security, LLC. ++# All rights reserved. ++# $COPYRIGHT$ ++# ++# Additional copyrights may follow ++# ++# $HEADER$ ++# ++ ++# This is the default system-wide MCA parameters defaults file. ++# Specifically, the MCA parameter "mca_param_files" defaults to a ++# value of ++# "$HOME/.openmpi/mca-params.conf:$sysconf/openmpi-mca-params.conf" ++# (this file is the latter of the two). So if the default value of ++# mca_param_files is not changed, this file is used to set system-wide ++# MCA parameters. This file can therefore be used to set system-wide ++# default MCA parameters for all users. Of course, users can override ++# these values if they want, but this file is an excellent location ++# for setting system-specific MCA parameters for those users who don't ++# know / care enough to investigate the proper values for them. ++ ++# Note that this file is only applicable where it is visible (in a ++# filesystem sense). Specifically, MPI processes each read this file ++# during their startup to determine what default values for MCA ++# parameters should be used. mpirun does not bundle up the values in ++# this file from the node where it was run and send them to all nodes; ++# the default value decisions are effectively distributed. Hence, ++# these values are only applicable on nodes that "see" this file. If ++# $sysconf is a directory on a local disk, it is likely that changes ++# to this file will need to be propagated to other nodes. If $sysconf ++# is a directory that is shared via a networked filesystem, changes to ++# this file will be visible to all nodes that share this $sysconf. ++ ++# The format is straightforward: one per line, mca_param_name = ++# rvalue. Quoting is ignored (so if you use quotes or escape ++# characters, they'll be included as part of the value). For example: ++ ++# Disable run-time MPI parameter checking ++# mpi_param_check = 0 ++ ++# Note that the value "~/" will be expanded to the current user's home ++# directory. For example: ++ ++# Change component loading path ++# component_path = /usr/local/lib/openmpi:~/my_openmpi_components ++ ++# See "ompi_info --param all all" for a full listing of Open MPI MCA ++# parameters available and their default values. ++# ++ ++# Basic behavior to smooth startup ++mca_component_show_load_errors = 0 ++orte_abort_timeout = 10 ++opal_set_max_sys_limits = 1 ++orte_report_launch_progress = 1 ++ ++# Define timeout for daemons to report back during launch ++orte_startup_timeout = 10000 ++ ++## Protect the shared file systems ++orte_no_session_dirs = /p,/usr/local,/usr/global,/nfs/tmp1,/nfs/tmp2 ++orte_tmpdir_base = /tmp ++ ++## Require an allocation to run - protects the frontend ++## from inadvertent job executions ++orte_allocation_required = 1 ++ ++## MPI behavior ++## Do NOT specify mpi_leave_pinned so system ++## can figure out for itself whether or not ++## it is supported and usable ++orte_notifier = syslog ++ ++## Add the interface for out-of-band communication ++## and set it up ++oob_tcp_if_include=ib0 ++oob_tcp_peer_retries = 1000 ++oob_tcp_disable_family = IPv6 ++oob_tcp_listen_mode = listen_thread ++oob_tcp_sndbuf = 32768 ++oob_tcp_rcvbuf = 32768 ++ ++## Define the MPI interconnects ++btl = sm,openib,self ++ ++## We are using the PSM MTL by default ++## There can only be one! ++pml = cm ++ ++## Setup OpenIB - just in case ++btl_openib_want_fork_support = 0 ++btl_openib_cpc_include = oob ++btl_openib_receive_queues = S,4096,1024:S,12288,512:S,65536,512 ++ ++## Enable cpu affinity ++opal_paffinity_alone = 1 ++ ++## Setup MPI options ++mpi_show_handle_leaks = 0 ++mpi_warn_on_fork = 1 ++mpi_abort_print_stack = 0 ++ |