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-rw-r--r--lib/spack/spack/environment/environment.py25
-rw-r--r--lib/spack/spack/spec_list.py6
-rw-r--r--lib/spack/spack/test/env.py69
3 files changed, 95 insertions, 5 deletions
diff --git a/lib/spack/spack/environment/environment.py b/lib/spack/spack/environment/environment.py
index ea4ac49a3a..8eb7edab40 100644
--- a/lib/spack/spack/environment/environment.py
+++ b/lib/spack/spack/environment/environment.py
@@ -2664,6 +2664,26 @@ class EnvironmentManifestFile(collections.abc.Mapping):
self.yaml_content = with_defaults_added
self.changed = False
+ def _all_matches(self, user_spec: str) -> List[str]:
+ """Maps the input string to the first equivalent user spec in the manifest,
+ and returns it.
+
+ Args:
+ user_spec: user spec to be found
+
+ Raises:
+ ValueError: if no equivalent match is found
+ """
+ result = []
+ for yaml_spec_str in self.pristine_configuration["specs"]:
+ if Spec(yaml_spec_str) == Spec(user_spec):
+ result.append(yaml_spec_str)
+
+ if not result:
+ raise ValueError(f"cannot find a spec equivalent to {user_spec}")
+
+ return result
+
def add_user_spec(self, user_spec: str) -> None:
"""Appends the user spec passed as input to the list of root specs.
@@ -2684,8 +2704,9 @@ class EnvironmentManifestFile(collections.abc.Mapping):
SpackEnvironmentError: when the user spec is not in the list
"""
try:
- self.pristine_configuration["specs"].remove(user_spec)
- self.configuration["specs"].remove(user_spec)
+ for key in self._all_matches(user_spec):
+ self.pristine_configuration["specs"].remove(key)
+ self.configuration["specs"].remove(key)
except ValueError as e:
msg = f"cannot remove {user_spec} from {self}, no such spec exists"
raise SpackEnvironmentError(msg) from e
diff --git a/lib/spack/spack/spec_list.py b/lib/spack/spack/spec_list.py
index 6cad15e14e..3f60d57249 100644
--- a/lib/spack/spack/spec_list.py
+++ b/lib/spack/spack/spec_list.py
@@ -97,8 +97,10 @@ class SpecList:
msg += "Either %s is not in %s or %s is " % (spec, self.name, spec)
msg += "expanded from a matrix and cannot be removed directly."
raise SpecListError(msg)
- assert len(remove) == 1
- self.yaml_list.remove(remove[0])
+
+ # Remove may contain more than one string representation of the same spec
+ for item in remove:
+ self.yaml_list.remove(item)
# invalidate cache variables when we change the list
self._expanded_list = None
diff --git a/lib/spack/spack/test/env.py b/lib/spack/spack/test/env.py
index 4396557f8a..e88af08761 100644
--- a/lib/spack/spack/test/env.py
+++ b/lib/spack/spack/test/env.py
@@ -13,7 +13,11 @@ import llnl.util.filesystem as fs
import spack.environment as ev
import spack.spec
-from spack.environment.environment import SpackEnvironmentViewError, _error_on_nonempty_view_dir
+from spack.environment.environment import (
+ EnvironmentManifestFile,
+ SpackEnvironmentViewError,
+ _error_on_nonempty_view_dir,
+)
pytestmark = pytest.mark.not_on_windows("Envs are not supported on windows")
@@ -623,3 +627,66 @@ def test_requires_on_virtual_and_potential_providers(
assert mpileaks.satisfies("^mpich2")
assert mpileaks["mpi"].satisfies("mpich2")
assert not mpileaks.satisfies(f"^{possible_mpi_spec}")
+
+
+@pytest.mark.regression("39387")
+@pytest.mark.parametrize(
+ "spec_str", ["mpileaks +opt", "mpileaks +opt ~shared", "mpileaks ~shared +opt"]
+)
+def test_manifest_file_removal_works_if_spec_is_not_normalized(tmp_path, spec_str):
+ """Tests that we can remove a spec from a manifest file even if its string
+ representation is not normalized.
+ """
+ manifest = tmp_path / "spack.yaml"
+ manifest.write_text(
+ f"""\
+spack:
+ specs:
+ - {spec_str}
+"""
+ )
+ s = spack.spec.Spec(spec_str)
+ spack_yaml = EnvironmentManifestFile(tmp_path)
+ # Doing a round trip str -> Spec -> str normalizes the representation
+ spack_yaml.remove_user_spec(str(s))
+ spack_yaml.flush()
+
+ assert spec_str not in manifest.read_text()
+
+
+@pytest.mark.regression("39387")
+@pytest.mark.parametrize(
+ "duplicate_specs,expected_number",
+ [
+ # Swap variants, versions, etc. add spaces
+ (["foo +bar ~baz", "foo ~baz +bar"], 3),
+ (["foo @1.0 ~baz %gcc", "foo ~baz @1.0%gcc"], 3),
+ # Item 1 and 3 are exactly the same
+ (["zlib +shared", "zlib +shared", "zlib +shared"], 4),
+ ],
+)
+def test_removing_spec_from_manifest_with_exact_duplicates(
+ duplicate_specs, expected_number, tmp_path
+):
+ """Tests that we can remove exact duplicates from a manifest file.
+
+ Note that we can't get in a state with duplicates using only CLI, but this might happen
+ on user edited spack.yaml files.
+ """
+ manifest = tmp_path / "spack.yaml"
+ manifest.write_text(
+ f"""\
+ spack:
+ specs: [{", ".join(duplicate_specs)} , "zlib"]
+ """
+ )
+
+ with ev.Environment(tmp_path) as env:
+ assert len(env.user_specs) == expected_number
+ env.remove(duplicate_specs[0])
+ env.write()
+
+ assert "+shared" not in manifest.read_text()
+ assert "zlib" in manifest.read_text()
+ with ev.Environment(tmp_path) as env:
+ assert len(env.user_specs) == 1