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-rw-r--r--share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml90
-rw-r--r--share/spack/gitlab/cloud_pipelines/stacks/aws-isc-aarch64/spack.yaml256
-rw-r--r--share/spack/gitlab/cloud_pipelines/stacks/aws-isc/spack.yaml258
3 files changed, 604 insertions, 0 deletions
diff --git a/share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml b/share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml
index b0936dfc4e..f956ebed9e 100644
--- a/share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml
+++ b/share/spack/gitlab/cloud_pipelines/.gitlab-ci.yml
@@ -52,12 +52,22 @@ default:
- runner_system_failure
- stuck_or_timeout_failure
+.generate-aarch64:
+ extends: [ ".generate" ]
+ tags: ["spack", "aws", "public", "medium", "aarch64"]
+
.pr-generate:
extends: [ ".pr", ".generate" ]
+.pr-generate-aarch64:
+ extends: [ ".pr", ".generate-aarch64" ]
+
.protected-generate:
extends: [ ".protected", ".generate" ]
+.protected-generate-aarch64:
+ extends: [ ".protected", ".generate-aarch64" ]
+
.build:
stage: build
@@ -424,6 +434,86 @@ data-vis-sdk-protected-build:
job: data-vis-sdk-protected-generate
########################################
+# AWS ISC Applications (x86_64)
+########################################
+
+# Call this AFTER .*-generate
+.aws-isc-overrides:
+ # This controls image for generate step; build step is controlled by spack.yaml
+ # Note that generator emits OS info for build so these should be the same.
+ image: { "name": "ghcr.io/spack/e4s-amazonlinux-2:v2022-03-21", "entrypoint": [""] }
+
+.aws-isc:
+ variables:
+ SPACK_CI_STACK_NAME: aws-isc
+
+aws-isc-pr-generate:
+ extends: [ ".aws-isc", ".pr-generate", ".aws-isc-overrides" ]
+ tags: ["spack", "public", "medium", "x86_64_v4"]
+
+aws-isc-protected-generate:
+ extends: [ ".aws-isc", ".protected-generate", ".aws-isc-overrides" ]
+ tags: ["spack", "public", "medium", "x86_64_v4"]
+
+aws-isc-pr-build:
+ extends: [ ".aws-isc", ".pr-build" ]
+ trigger:
+ include:
+ - artifact: jobs_scratch_dir/cloud-ci-pipeline.yml
+ job: aws-isc-pr-generate
+ strategy: depend
+ needs:
+ - artifacts: True
+ job: aws-isc-pr-generate
+
+aws-isc-protected-build:
+ extends: [ ".aws-isc", ".protected-build" ]
+ trigger:
+ include:
+ - artifact: jobs_scratch_dir/cloud-ci-pipeline.yml
+ job: aws-isc-protected-generate
+ strategy: depend
+ needs:
+ - artifacts: True
+ job: aws-isc-protected-generate
+
+
+# Parallel Pipeline for aarch64 (reuses override image, but generates and builds on aarch64)
+
+.aws-isc-aarch64:
+ variables:
+ SPACK_CI_STACK_NAME: aws-isc-aarch64
+
+aws-isc-aarch64-pr-generate:
+ extends: [ ".aws-isc-aarch64", ".pr-generate-aarch64", ".aws-isc-overrides" ]
+
+aws-isc-aarch64-protected-generate:
+ extends: [ ".aws-isc-aarch64", ".protected-generate-aarch64", ".aws-isc-overrides" ]
+
+aws-isc-aarch64-pr-build:
+ extends: [ ".aws-isc-aarch64", ".pr-build" ]
+ trigger:
+ include:
+ - artifact: jobs_scratch_dir/cloud-ci-pipeline.yml
+ job: aws-isc-aarch64-pr-generate
+ strategy: depend
+ needs:
+ - artifacts: True
+ job: aws-isc-aarch64-pr-generate
+
+aws-isc-aarch64-protected-build:
+ extends: [ ".aws-isc-aarch64", ".protected-build" ]
+ trigger:
+ include:
+ - artifact: jobs_scratch_dir/cloud-ci-pipeline.yml
+ job: aws-isc-aarch64-protected-generate
+ strategy: depend
+ needs:
+ - artifacts: True
+ job: aws-isc-aarch64-protected-generate
+
+
+########################################
# Spack Tutorial
########################################
.tutorial:
diff --git a/share/spack/gitlab/cloud_pipelines/stacks/aws-isc-aarch64/spack.yaml b/share/spack/gitlab/cloud_pipelines/stacks/aws-isc-aarch64/spack.yaml
new file mode 100644
index 0000000000..4d76ffee72
--- /dev/null
+++ b/share/spack/gitlab/cloud_pipelines/stacks/aws-isc-aarch64/spack.yaml
@@ -0,0 +1,256 @@
+spack:
+ view: false
+
+ concretizer:
+ reuse: false
+ unify: false
+
+ config:
+ concretizer: clingo
+ install_tree:
+ root: /home/software/spack
+ padded_length: 384
+ projections:
+ all: '{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'
+
+ packages:
+ all:
+ providers:
+ blas:
+ - openblas
+ mkl:
+ - intel-oneapi-mkl
+ mpi:
+ - openmpi
+ - mpich
+ variants: +mpi
+ binutils:
+ variants: +ld +gold +headers +libiberty ~nls
+ version:
+ - 2.36.1
+ doxygen:
+ version:
+ - 1.8.20
+ elfutils:
+ variants: +bzip2 ~nls +xz
+ hdf5:
+ variants: +fortran +hl +shared
+ libfabric:
+ variants: fabrics=efa,tcp,udp,sockets,verbs,shm,mrail,rxd,rxm
+ libunwind:
+ variants: +pic +xz
+ mesa:
+ variants: ~llvm
+ mesa18:
+ variants: ~llvm
+ mpich:
+ variants: ~wrapperrpath netmod=ofi device=ch4
+ ncurses:
+ variants: +termlib
+ openblas:
+ variants: threads=openmp
+ openmpi:
+ variants: fabrics=ofi +legacylaunchers
+ openturns:
+ version: [1.18]
+ relion:
+ variants: ~mklfft
+# texlive:
+# version: [20210325]
+ trilinos:
+ variants: +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext +ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu +nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos +teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
+ xz:
+ variants: +pic
+
+ definitions:
+
+ - compiler_specs:
+ - gcc@11.2
+ # Licensing OK?
+ # - intel-oneapi-compilers@2022.1
+ # - nvhpc
+
+ - cuda_specs:
+ # Depends on ctffind which embeds fsincos (x86-specific asm) within code. Will not build on ARM
+ #- relion +cuda cuda_arch=70
+ - raja +cuda cuda_arch=70
+ - mfem +cuda cuda_arch=70
+
+ - app_specs:
+ - bwa
+# Depends on simde which requires newer compiler?
+ #- bowtie2
+ # Requires x86_64 specific ASM
+ #- cistem
+ - cromwell
+ - fastqc
+ - flux-sched
+ - flux-core
+ - flux-pmix
+ - gatk
+ - gromacs
+ - lammps
+ - wrf build_type=dm+sm
+ - mfem
+ - mpas-model ^parallelio+pnetcdf
+ - nextflow
+ - octave
+ - openfoam
+ - osu-micro-benchmarks
+ - parallel
+ - paraview
+ - picard
+ - quantum-espresso
+ - raja
+# Depends on bowtie2 -> simde which requires newer compiler?
+ #- rsem
+ # Errors on texlive
+ #- rstudio
+ - salmon
+ - samtools
+ - seqtk
+ - snakemake
+ - star
+ # Requires gcc@9:
+ #- ufs-weather-model
+# requires LLVM which fails without constraint
+ #- visit
+
+ - lib_specs:
+ - openmpi fabrics=ofi
+ - openmpi fabrics=ofi +legacylaunchers
+ - openmpi fabrics=auto
+ - mpich
+ - libfabric
+
+ - compiler:
+ - '%gcc@7.3.1'
+
+ - target:
+ - 'target=aarch64'
+ - 'target=graviton2'
+
+
+ specs:
+
+ - matrix:
+ - - $cuda_specs
+ - - $compiler
+ - - $target
+
+ - matrix:
+ - - $app_specs
+ - - $compiler
+ - - $target
+
+ - matrix:
+ - - $lib_specs
+ - - $compiler
+ - - $target
+
+ - matrix:
+ - - $compiler_specs
+ - - $compiler
+ - - $target
+
+
+ mirrors: { "mirror": "s3://spack-binaries/develop/aws-isc-aarch64" }
+
+ gitlab-ci:
+
+ script:
+ - . "./share/spack/setup-env.sh"
+ - spack --version
+ - cd ${SPACK_CONCRETE_ENV_DIR}
+ - spack env activate --without-view .
+ - spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
+ - mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
+ - if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
+ - if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
+ - spack -d ci rebuild > >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_out.txt) 2> >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_err.txt >&2)
+
+ image: { "name": "ghcr.io/spack/e4s-amazonlinux-2:v2022-03-21", "entrypoint": [""] }
+ mappings:
+ - match:
+ - llvm
+ - llvm-amdgpu
+ - paraview
+ runner-attributes:
+ tags: [ "spack", "huge", "aarch64" ]
+ variables:
+ CI_JOB_SIZE: huge
+ KUBERNETES_CPU_REQUEST: 15000m
+ KUBERNETES_MEMORY_REQUEST: 62G
+
+
+ - match:
+ - ascent
+ - atk
+ - axom
+ - cistem
+ - ctffind
+ - cuda
+ - dyninst
+ - gcc
+ - ginkgo
+ - hdf5
+ - hpx
+ - kokkos-kernels
+ - kokkos-nvcc-wrapper
+ - magma
+ - mfem
+ - mpich
+ - openturns
+ - parallelio
+ - precice
+ - raja
+ - relion
+ - rocblas
+ - rocsolver
+ - rust
+ - slate
+ - strumpack
+ - sundials
+ - trilinos
+ - umpire
+ - vtk
+ - vtk-h
+ - vtk-m
+ - warpx
+ - wrf
+ - wxwidgets
+ runner-attributes:
+ tags: [ "spack", "large", "aarch64" ]
+ variables:
+ CI_JOB_SIZE: large
+ KUBERNETES_CPU_REQUEST: 8000m
+ KUBERNETES_MEMORY_REQUEST: 12G
+
+ - match: ['os=amzn2']
+ runner-attributes:
+ tags: ["spack", "aarch64"]
+ variables:
+ CI_JOB_SIZE: "default"
+
+ broken-specs-url: "s3://spack-binaries/broken-specs"
+
+ service-job-attributes:
+ before_script:
+ - . "./share/spack/setup-env.sh"
+ - spack --version
+ image: { "name": "ghcr.io/spack/e4s-amazonlinux-2:v2022-03-21", "entrypoint": [""] }
+ tags: ["spack", "public", "aarch64"]
+
+ signing-job-attributes:
+ image: { "name": "ghcr.io/spack/notary:latest", "entrypoint": [""] }
+ tags: ["spack", "aws"]
+ script:
+ - aws s3 sync --exclude "*" --include "*spec.json*" ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache /tmp
+ - /sign.sh
+ - aws s3 sync --exclude "*" --include "*spec.json.sig*" /tmp ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache
+
+ cdash:
+ build-group: AWS Packages
+ url: https://cdash.spack.io
+ project: Spack Testing
+ site: Cloud Gitlab Infrastructure
diff --git a/share/spack/gitlab/cloud_pipelines/stacks/aws-isc/spack.yaml b/share/spack/gitlab/cloud_pipelines/stacks/aws-isc/spack.yaml
new file mode 100644
index 0000000000..27de37b1f5
--- /dev/null
+++ b/share/spack/gitlab/cloud_pipelines/stacks/aws-isc/spack.yaml
@@ -0,0 +1,258 @@
+spack:
+ view: false
+
+ concretizer:
+ reuse: false
+ unify: false
+
+ config:
+ concretizer: clingo
+ install_tree:
+ root: /home/software/spack
+ padded_length: 384
+ projections:
+ all: '{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'
+
+ packages:
+ all:
+ providers:
+ blas:
+ - openblas
+ mkl:
+ - intel-oneapi-mkl
+ mpi:
+ - openmpi
+ - mpich
+ variants: +mpi
+ binutils:
+ variants: +ld +gold +headers +libiberty ~nls
+ version:
+ - 2.36.1
+ doxygen:
+ version:
+ - 1.8.20
+ elfutils:
+ variants: +bzip2 ~nls +xz
+ hdf5:
+ variants: +fortran +hl +shared
+ libfabric:
+ variants: fabrics=efa,tcp,udp,sockets,verbs,shm,mrail,rxd,rxm
+ libunwind:
+ variants: +pic +xz
+ mesa:
+ variants: ~llvm
+ mesa18:
+ variants: ~llvm
+ mpich:
+ variants: ~wrapperrpath netmod=ofi device=ch4
+ ncurses:
+ variants: +termlib
+ openblas:
+ variants: threads=openmp
+ openmpi:
+ variants: fabrics=ofi +legacylaunchers
+ openturns:
+ version: [1.18]
+ relion:
+ variants: ~mklfft
+# texlive:
+# version: [20210325]
+ trilinos:
+ variants: +amesos +amesos2 +anasazi +aztec +belos +boost +epetra +epetraext +ifpack +ifpack2 +intrepid +intrepid2 +isorropia +kokkos +ml +minitensor +muelu +nox +piro +phalanx +rol +rythmos +sacado +stk +shards +shylu +stokhos +stratimikos +teko +tempus +tpetra +trilinoscouplings +zoltan +zoltan2 +superlu-dist gotype=long_long
+ xz:
+ variants: +pic
+
+ definitions:
+
+ - compiler_specs:
+ - gcc@11.2
+ # Licensing OK?
+ # - intel-oneapi-compilers@2022.1
+ # - nvhpc
+
+ - cuda_specs:
+# Disabled for consistency with aarch64
+ #- relion +cuda cuda_arch=70
+ - raja +cuda cuda_arch=70
+ - mfem +cuda cuda_arch=70
+
+ - app_specs:
+ - bwa
+# Disabled for consistency with aarch64
+ #- bowtie2
+# Disabled for consistency with aarch64
+ #- cistem
+ - cromwell
+ - fastqc
+ - flux-sched
+ - flux-core
+ - flux-pmix
+ - gatk
+ - gromacs
+ - lammps
+ - wrf build_type=dm+sm
+ - mfem
+ - mpas-model ^parallelio+pnetcdf
+ - nextflow
+ - octave
+ - openfoam
+ - osu-micro-benchmarks
+ - parallel
+ - paraview
+ - picard
+ - quantum-espresso
+# Build broken for gcc@7.3.1 x86_64_v4 (error: '_mm512_loadu_epi32' was not declared in this scope)
+ #- raja
+# Disabled for consistency with aarch64
+ #- rsem
+ # Errors on texlive
+ #- rstudio
+ - salmon
+ - samtools
+ - seqtk
+ - snakemake
+ - star
+ # Requires gcc@9:
+ #- ufs-weather-model
+# Disabled for consistency with aarch64
+ #- visit
+
+ - lib_specs:
+ - openmpi fabrics=ofi
+ - openmpi fabrics=ofi +legacylaunchers
+ - openmpi fabrics=auto
+ - mpich
+ - libfabric
+
+ - compiler:
+ - '%gcc@7.3.1'
+
+ - target:
+ - 'target=x86_64_v3'
+ - 'target=x86_64_v4'
+
+
+ specs:
+
+ - matrix:
+ - - $cuda_specs
+ - - $compiler
+ - - $target
+
+ - matrix:
+ - - $app_specs
+ - - $compiler
+ - - $target
+
+ - matrix:
+ - - $lib_specs
+ - - $compiler
+ - - $target
+
+ - matrix:
+ - - $compiler_specs
+ - - $compiler
+ - - $target
+
+
+ mirrors: { "mirror": "s3://spack-binaries/develop/aws-isc" }
+
+ gitlab-ci:
+
+ script:
+ - . "./share/spack/setup-env.sh"
+ - spack --version
+ - cd ${SPACK_CONCRETE_ENV_DIR}
+ - spack env activate --without-view .
+ - spack config add "config:install_tree:projections:${SPACK_JOB_SPEC_PKG_NAME}:'morepadding/{architecture}/{compiler.name}-{compiler.version}/{name}-{version}-{hash}'"
+ - mkdir -p ${SPACK_ARTIFACTS_ROOT}/user_data
+ - if [[ -r /mnt/key/intermediate_ci_signing_key.gpg ]]; then spack gpg trust /mnt/key/intermediate_ci_signing_key.gpg; fi
+ - if [[ -r /mnt/key/spack_public_key.gpg ]]; then spack gpg trust /mnt/key/spack_public_key.gpg; fi
+ - spack -d ci rebuild > >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_out.txt) 2> >(tee ${SPACK_ARTIFACTS_ROOT}/user_data/pipeline_err.txt >&2)
+
+ image: { "name": "ghcr.io/spack/e4s-amazonlinux-2:v2022-03-21", "entrypoint": [""] }
+ mappings:
+ - match:
+ - llvm
+ - llvm-amdgpu
+ - pango
+ - paraview
+ runner-attributes:
+ tags: [ "spack", "huge", "x86_64_v4" ]
+ variables:
+ CI_JOB_SIZE: huge
+ KUBERNETES_CPU_REQUEST: 11000m
+ KUBERNETES_MEMORY_REQUEST: 42G
+
+
+ - match:
+ - ascent
+ - atk
+ - axom
+ - cistem
+ - ctffind
+ - cuda
+ - dyninst
+ - gcc
+ - ginkgo
+ - hdf5
+ - hpx
+ - kokkos-kernels
+ - kokkos-nvcc-wrapper
+ - magma
+ - mfem
+ - mpich
+ - openturns
+ - parallelio
+ - precice
+ - raja
+ - relion
+ - rocblas
+ - rocsolver
+ - rust
+ - slate
+ - strumpack
+ - sundials
+ - trilinos
+ - umpire
+ - vtk
+ - vtk-h
+ - vtk-m
+ - warpx
+ - wrf
+ - wxwidgets
+ runner-attributes:
+ tags: [ "spack", "large", "x86_64_v4" ]
+ variables:
+ CI_JOB_SIZE: large
+ KUBERNETES_CPU_REQUEST: 8000m
+ KUBERNETES_MEMORY_REQUEST: 12G
+
+ - match: ['os=amzn2']
+ runner-attributes:
+ tags: ["spack", "x86_64_v4"]
+ variables:
+ CI_JOB_SIZE: "default"
+
+ broken-specs-url: "s3://spack-binaries/broken-specs"
+
+ service-job-attributes:
+ before_script:
+ - . "./share/spack/setup-env.sh"
+ - spack --version
+ image: { "name": "ghcr.io/spack/e4s-amazonlinux-2:v2022-03-21", "entrypoint": [""] }
+ tags: ["spack", "public", "x86_64_v4"]
+
+ signing-job-attributes:
+ image: { "name": "ghcr.io/spack/notary:latest", "entrypoint": [""] }
+ tags: ["spack", "aws"]
+ script:
+ - aws s3 sync --exclude "*" --include "*spec.json*" ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache /tmp
+ - /sign.sh
+ - aws s3 sync --exclude "*" --include "*spec.json.sig*" /tmp ${SPACK_REMOTE_MIRROR_OVERRIDE}/build_cache
+
+ cdash:
+ build-group: AWS Packages
+ url: https://cdash.spack.io
+ project: Spack Testing
+ site: Cloud Gitlab Infrastructure