diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/amrfinder/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/amrfinder/package.py | 28 |
1 files changed, 14 insertions, 14 deletions
diff --git a/var/spack/repos/builtin/packages/amrfinder/package.py b/var/spack/repos/builtin/packages/amrfinder/package.py index ce7278293d..32cce65ab1 100644 --- a/var/spack/repos/builtin/packages/amrfinder/package.py +++ b/var/spack/repos/builtin/packages/amrfinder/package.py @@ -9,27 +9,27 @@ from spack.package import * class Amrfinder(MakefilePackage): """NCBI AMRFinderPlus: This software and the accompanying database identify - acquired antimicrobial resistance genes in bacterial protein and/or - assembled nucleotide sequences as well as known resistance-associated - point mutations for several taxa. With AMRFinderPlus we added select - members of additional classes of genes such as virulence factors, - biocide, heat, acid, and metal resistance genes.""" + acquired antimicrobial resistance genes in bacterial protein and/or + assembled nucleotide sequences as well as known resistance-associated + point mutations for several taxa. With AMRFinderPlus we added select + members of additional classes of genes such as virulence factors, + biocide, heat, acid, and metal resistance genes.""" homepage = "https://github.com/ncbi/amr/wiki" - url = "https://github.com/ncbi/amr/archive/refs/tags/amrfinder_v3.10.30.tar.gz" + url = "https://github.com/ncbi/amr/archive/refs/tags/amrfinder_v3.10.30.tar.gz" - version('3.10.30', sha256='2f1e30b86935a27cee740bd7229a41fbce278f2f60b33b8e51592bab8bdf23f1') - version('3.10.24', sha256='fce299c980cda740dcc4f53f9b2dc9061c856213e5bdbc2c339185a5fb7dcf6a') + version("3.10.30", sha256="2f1e30b86935a27cee740bd7229a41fbce278f2f60b33b8e51592bab8bdf23f1") + version("3.10.24", sha256="fce299c980cda740dcc4f53f9b2dc9061c856213e5bdbc2c339185a5fb7dcf6a") - depends_on('blast-plus') - depends_on('hmmer') - depends_on('curl') + depends_on("blast-plus") + depends_on("hmmer") + depends_on("curl") def setup_build_environment(self, env): - env.set('INSTALL_DIR', prefix.bin) - env.set('DEFAULT_DB_DIR', prefix.share) + env.set("INSTALL_DIR", prefix.bin) + env.set("DEFAULT_DB_DIR", prefix.share) - @run_before('build') + @run_before("build") def create_bin_and_share(self): mkdirp(self.spec.prefix.bin) mkdirp(self.spec.prefix.share) |