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Diffstat (limited to 'var/spack/repos/builtin/packages/bowtie2/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/bowtie2/package.py | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/bowtie2/package.py b/var/spack/repos/builtin/packages/bowtie2/package.py new file mode 100644 index 0000000000..339aab6598 --- /dev/null +++ b/var/spack/repos/builtin/packages/bowtie2/package.py @@ -0,0 +1,24 @@ +from spack import * +from glob import glob +class Bowtie2(Package): + """Description""" + homepage = "bowtie-bio.sourceforge.net/bowtie2/index.shtml" + version('2.2.5','51fa97a862d248d7ee660efc1147c75f', url = "http://downloads.sourceforge.net/project/bowtie-bio/bowtie2/2.2.5/bowtie2-2.2.5-source.zip") + + patch('bowtie2-2.5.patch',when='@2.2.5', level=0) + + def install(self, spec, prefix): + make() + mkdirp(prefix.bin) + for bow in glob("bowtie2*"): + install(bow, prefix.bin) + # install('bowtie2',prefix.bin) + # install('bowtie2-align-l',prefix.bin) + # install('bowtie2-align-s',prefix.bin) + # install('bowtie2-build',prefix.bin) + # install('bowtie2-build-l',prefix.bin) + # install('bowtie2-build-s',prefix.bin) + # install('bowtie2-inspect',prefix.bin) + # install('bowtie2-inspect-l',prefix.bin) + # install('bowtie2-inspect-s',prefix.bin) + |