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Diffstat (limited to 'var/spack/repos/builtin/packages/breseq/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/breseq/package.py | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/breseq/package.py b/var/spack/repos/builtin/packages/breseq/package.py new file mode 100644 index 0000000000..6e406fba6a --- /dev/null +++ b/var/spack/repos/builtin/packages/breseq/package.py @@ -0,0 +1,25 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Breseq(AutotoolsPackage): + """breseq is a computational pipeline for finding mutations relative to a + reference sequence in short-read DNA re-sequencing data for haploid + microbial-sized genomes.""" + + homepage = "http://barricklab.org/breseq" + url = "https://github.com/barricklab/breseq/archive/v0.31.1.tar.gz" + + version('0.31.1', 'a4e602d5481f8692833ba3d5a3cd0394') + + depends_on('autoconf', type='build') + depends_on('automake', type='build') + depends_on('libtool', type='build') + depends_on('m4', type='build') + + depends_on('bedtools2', type='run') + depends_on('r', type='run') |