diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/eagle/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/eagle/package.py | 35 |
1 files changed, 17 insertions, 18 deletions
diff --git a/var/spack/repos/builtin/packages/eagle/package.py b/var/spack/repos/builtin/packages/eagle/package.py index ff522b406c..fead6df413 100644 --- a/var/spack/repos/builtin/packages/eagle/package.py +++ b/var/spack/repos/builtin/packages/eagle/package.py @@ -10,44 +10,43 @@ class Eagle(MakefilePackage): """EAGLE: Explicit Alternative Genome Likelihood Evaluator""" homepage = "https://github.com/tony-kuo/eagle" - url = "https://github.com/tony-kuo/eagle/archive/v1.1.2.tar.gz" - maintainers = ['snehring'] + url = "https://github.com/tony-kuo/eagle/archive/v1.1.2.tar.gz" + maintainers = ["snehring"] - version('1.1.3', sha256='bd510b8eef2de14898cbf417e1c7a30b97ddaba24e5e2834da7b02767362fe3c') - version('1.1.2', sha256='afe967560d1f8fdbd0caf4b93b5f2a86830e9e4d399fee4a526140431343045e') + version("1.1.3", sha256="bd510b8eef2de14898cbf417e1c7a30b97ddaba24e5e2834da7b02767362fe3c") + version("1.1.2", sha256="afe967560d1f8fdbd0caf4b93b5f2a86830e9e4d399fee4a526140431343045e") - depends_on('curl') - depends_on('zlib') - depends_on('lzma') - depends_on('htslib') + depends_on("curl") + depends_on("zlib") + depends_on("lzma") + depends_on("htslib") def edit(self, spec, prefix): # remove unused gcc flags - filter_file('$(LFLAGS) $(INCLUDES)', '', 'Makefile', string=True) + filter_file("$(LFLAGS) $(INCLUDES)", "", "Makefile", string=True) # drop static link to htslib - filter_file('$(LIBS)', '', 'Makefile', string=True) + filter_file("$(LIBS)", "", "Makefile", string=True) # don't try to build htslib. - filter_file('all: UTIL HTSLIB', 'all: UTIL', - 'Makefile', string=True) + filter_file("all: UTIL HTSLIB", "all: UTIL", "Makefile", string=True) # add htslib link to ldflags - filter_file('-lcurl', '-lcurl -lhts', 'Makefile', string=True) + filter_file("-lcurl", "-lcurl -lhts", "Makefile", string=True) # use spack C compiler - filter_file('CC=.*', 'CC={0}'.format(spack_cc), 'Makefile') + filter_file("CC=.*", "CC={0}".format(spack_cc), "Makefile") # let the user inject march if they want - filter_file('-march=native', '', 'Makefile', string=True) + filter_file("-march=native", "", "Makefile", string=True) def install(self, spec, prefix): mkdirp(prefix.bin) bins = [ - 'eagle', - 'eagle-rc', - 'eagle-nm', + "eagle", + "eagle-rc", + "eagle-nm", ] for b in bins: |