1 files changed, 31 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/fasttree/package.py b/var/spack/repos/builtin/packages/fasttree/package.py
new file mode 100644
index 0000000000..813b5eb0d6
--- /dev/null
+++ b/var/spack/repos/builtin/packages/fasttree/package.py
@@ -0,0 +1,31 @@
+# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack import *
+
+
+class Fasttree(Package):
+    """FastTree infers approximately-maximum-likelihood phylogenetic
+       trees from alignments of nucleotide or protein sequences.
+       FastTree can handle alignments with up to a million of sequences
+       in a reasonable amount of time and memory."""
+
+    homepage = "http://www.microbesonline.org/fasttree"
+    url      = "http://www.microbesonline.org/fasttree/FastTree-2.1.10.c"
+
+    version('2.1.10', '1c2c6425a638ec0c61ef064cda687987', expand=False, url='http://www.microbesonline.org/fasttree/FastTree-2.1.10.c')
+
+    phases = ['build', 'install']
+
+    def build(self, spec, prefix):
+        cc = Executable(spack_cc)
+        cc('-O3', self.compiler.openmp_flag,
+           '-DOPENMP', '-finline-functions', '-funroll-loops', '-Wall',
+           '-oFastTreeMP', 'FastTree-' + format(spec.version.dotted) + '.c',
+           '-lm')
+
+    def install(self, spec, prefix):
+        mkdir(prefix.bin)
+        install('FastTreeMP', prefix.bin)