diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/gcta/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/gcta/package.py | 66 |
1 files changed, 33 insertions, 33 deletions
diff --git a/var/spack/repos/builtin/packages/gcta/package.py b/var/spack/repos/builtin/packages/gcta/package.py index 6cf9146260..4ee4e536d1 100644 --- a/var/spack/repos/builtin/packages/gcta/package.py +++ b/var/spack/repos/builtin/packages/gcta/package.py @@ -14,26 +14,26 @@ class Gcta(CMakePackage): complex traits. GCTA currently supports the following analyses.""" homepage = "https://github.com/jianyangqt/gcta" - url = "https://github.com/jianyangqt/gcta/archive/refs/tags/v1.91.2.tar.gz" - git = "https://github.com/jianyangqt/gcta.git" - maintainers = ['snehring'] + url = "https://github.com/jianyangqt/gcta/archive/refs/tags/v1.91.2.tar.gz" + git = "https://github.com/jianyangqt/gcta.git" + maintainers = ["snehring"] - version('1.94.0beta', commit='746e3975ddb463fc7bd15b03c6cc64b023eca497', submodules=True) - version('1.91.2', sha256='0609d0fba856599a2acc66adefe87725304117acc226360ec2aabf8a0ac64e85') + version("1.94.0beta", commit="746e3975ddb463fc7bd15b03c6cc64b023eca497", submodules=True) + version("1.91.2", sha256="0609d0fba856599a2acc66adefe87725304117acc226360ec2aabf8a0ac64e85") - conflicts('target=aarch64:', when='@:1.91.2', msg='aarch64 support added in 1.94.0') + conflicts("target=aarch64:", when="@:1.91.2", msg="aarch64 support added in 1.94.0") - depends_on('cmake@3.1:', type='build') - depends_on('intel-mkl@2017:', when='target=x86_64:') - depends_on('openblas', when='target=aarch64:') - depends_on('eigen@3.3.1', when='@1.91.2') - depends_on('eigen@3.3.7:', when='@1.94.0beta:') - depends_on('boost@1.79:', when='@1.94.0beta:') - depends_on('zlib') - depends_on('sqlite@3.3.1:', when='@1.94.0beta:') - depends_on('zstd@1.4.4:', when='@1.94.0beta:') - depends_on('spectra', when='@1.94.0beta:') - depends_on('gsl', when='@1.94.0beta:') + depends_on("cmake@3.1:", type="build") + depends_on("intel-mkl@2017:", when="target=x86_64:") + depends_on("openblas", when="target=aarch64:") + depends_on("eigen@3.3.1", when="@1.91.2") + depends_on("eigen@3.3.7:", when="@1.94.0beta:") + depends_on("boost@1.79:", when="@1.94.0beta:") + depends_on("zlib") + depends_on("sqlite@3.3.1:", when="@1.94.0beta:") + depends_on("zstd@1.4.4:", when="@1.94.0beta:") + depends_on("spectra", when="@1.94.0beta:") + depends_on("gsl", when="@1.94.0beta:") def patch(self): # allow us to specify the locations with cmake_args @@ -42,33 +42,33 @@ class Gcta(CMakePackage): 'SET(SPECTRA_LIB "$ENV{SPECTRA_LIB}")', 'SET(BOOST_LIB "$ENV{BOOST_LIB}")', 'SET(OPENBLAS "$ENV{OPENBLAS}")', - 'SET(MKLROOT "$ENV{MKLROOT}")' + 'SET(MKLROOT "$ENV{MKLROOT}")', ] for s in strings: - filter_file(s, '', 'CMakeLists.txt', string=True) + filter_file(s, "", "CMakeLists.txt", string=True) def cmake_args(self): - eigen = self.spec['eigen'].prefix.include - args = [self.define('EIGEN3_INCLUDE_DIR', eigen)] - if self.spec.satisfies('@1.94.0beta:'): - spectra = self.spec['spectra'].prefix.include - boost = self.spec['boost'].prefix.include + eigen = self.spec["eigen"].prefix.include + args = [self.define("EIGEN3_INCLUDE_DIR", eigen)] + if self.spec.satisfies("@1.94.0beta:"): + spectra = self.spec["spectra"].prefix.include + boost = self.spec["boost"].prefix.include deps = [ - self.define('SPECTRA_LIB', spectra), - self.define('BOOST_LIB', boost), + self.define("SPECTRA_LIB", spectra), + self.define("BOOST_LIB", boost), ] args.extend(deps) - if self.spec.satisfies('target=x86_64:'): - mkl = self.spec['intel-mkl'].prefix - args.append(self.define('MKLROOT', mkl)) - elif self.spec.satisfies('target=aarch64:'): - openblas = self.spec['openblas'].prefix - args.append(self.define('OPENBLAS', openblas)) + if self.spec.satisfies("target=x86_64:"): + mkl = self.spec["intel-mkl"].prefix + args.append(self.define("MKLROOT", mkl)) + elif self.spec.satisfies("target=aarch64:"): + openblas = self.spec["openblas"].prefix + args.append(self.define("OPENBLAS", openblas)) return args def install(self, spec, prefix): mkdirp(prefix.bin) with working_dir(self.build_directory): - install('gcta64', join_path(prefix.bin, 'gcta64')) + install("gcta64", join_path(prefix.bin, "gcta64")) |