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Diffstat (limited to 'var/spack/repos/builtin/packages/gcta/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/gcta/package.py | 29 |
1 files changed, 29 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/gcta/package.py b/var/spack/repos/builtin/packages/gcta/package.py new file mode 100644 index 0000000000..8ff01ebe05 --- /dev/null +++ b/var/spack/repos/builtin/packages/gcta/package.py @@ -0,0 +1,29 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Gcta(Package): + + """GCTA (Genome-wide Complex Trait Analysis) was originally designed to + estimate the proportion of phenotypic variance explained by all genome-wide + SNPs for complex traits (the GREML method), and has subsequently extended + for many other analyses to better understand the genetic architecture of + complex traits. GCTA currently supports the following analyses.""" + + homepage = "http://cnsgenomics.com/software/gcta/#Overview" + url = "http://cnsgenomics.com/software/gcta/gcta_1.91.2beta.zip" + + version('1.91.2beta_mac', 'ce0882ad35dd9474ffe40911da369274700af1ecb9916c0a355b7bad14850234') + version('1.91.2beta', '192efb767be1c7ca9c2dac5d2c2317a97c7a9db1f801168d19ad2a51b98d9b10', preferred=True) + + conflicts('@1.91.2beta', when='platform=darwin') + conflicts('@1.91.2beta_mac', when='platform=linux') + + def install(self, spec, prefix): + mkdirp(prefix.bin) + install('gcta64', join_path(prefix.bin, 'gcta64')) + set_executable(join_path(prefix.bin, 'gcta64')) |