diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/grnboost/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/grnboost/package.py | 39 |
1 files changed, 21 insertions, 18 deletions
diff --git a/var/spack/repos/builtin/packages/grnboost/package.py b/var/spack/repos/builtin/packages/grnboost/package.py index 99795b447f..dd03adfcfe 100644 --- a/var/spack/repos/builtin/packages/grnboost/package.py +++ b/var/spack/repos/builtin/packages/grnboost/package.py @@ -17,26 +17,29 @@ class Grnboost(Package): homepage = "https://github.com/aertslab/GRNBoost" - version('2017-10-9', git='https://github.com/aertslab/GRNBoost.git', - commit='26c836b3dcbb85852d3c6f4b8340e8655434da02') + version( + "2017-10-9", + git="https://github.com/aertslab/GRNBoost.git", + commit="26c836b3dcbb85852d3c6f4b8340e8655434da02", + ) - depends_on('sbt', type='build') - depends_on('java', type=('build', 'run')) - depends_on('xgboost', type='run') - depends_on('spark+hadoop', type='run') + depends_on("sbt", type="build") + depends_on("java", type=("build", "run")) + depends_on("xgboost", type="run") + depends_on("spark+hadoop", type="run") def setup_run_environment(self, env): - grnboost_jar = join_path(self.prefix, 'target', - 'scala-2.11', 'GRNBoost.jar') - xgboost_version = self.spec['xgboost'].version.string - xgboost_jar = join_path(self.spec['xgboost'].prefix, - 'xgboost4j-' + xgboost_version + '.jar') - env.set('GRNBOOST_JAR', grnboost_jar) - env.set('JAVA_HOME', self.spec['java'].prefix) - env.set('CLASSPATH', xgboost_jar) - env.set('XGBOOST_JAR', xgboost_jar) + grnboost_jar = join_path(self.prefix, "target", "scala-2.11", "GRNBoost.jar") + xgboost_version = self.spec["xgboost"].version.string + xgboost_jar = join_path( + self.spec["xgboost"].prefix, "xgboost4j-" + xgboost_version + ".jar" + ) + env.set("GRNBOOST_JAR", grnboost_jar) + env.set("JAVA_HOME", self.spec["java"].prefix) + env.set("CLASSPATH", xgboost_jar) + env.set("XGBOOST_JAR", xgboost_jar) def install(self, spec, prefix): - sbt = which('sbt') - sbt('assembly') - install_tree('target', prefix.target) + sbt = which("sbt") + sbt("assembly") + install_tree("target", prefix.target) |