diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/hmmer/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/hmmer/package.py | 38 |
1 files changed, 6 insertions, 32 deletions
diff --git a/var/spack/repos/builtin/packages/hmmer/package.py b/var/spack/repos/builtin/packages/hmmer/package.py index 2681282b7d..2b9b045a00 100644 --- a/var/spack/repos/builtin/packages/hmmer/package.py +++ b/var/spack/repos/builtin/packages/hmmer/package.py @@ -1,27 +1,8 @@ -############################################################################## -# Copyright (c) 2013-2017, Lawrence Livermore National Security, LLC. -# Produced at the Lawrence Livermore National Laboratory. +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. # -# This file is part of Spack. -# Created by Todd Gamblin, tgamblin@llnl.gov, All rights reserved. -# LLNL-CODE-647188 -# -# For details, see https://github.com/spack/spack -# Please also see the NOTICE and LICENSE files for our notice and the LGPL. -# -# This program is free software; you can redistribute it and/or modify -# it under the terms of the GNU Lesser General Public License (as -# published by the Free Software Foundation) version 2.1, February 1999. -# -# This program is distributed in the hope that it will be useful, but -# WITHOUT ANY WARRANTY; without even the IMPLIED WARRANTY OF -# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the terms and -# conditions of the GNU Lesser General Public License for more details. -# -# You should have received a copy of the GNU Lesser General Public -# License along with this program; if not, write to the Free Software -# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA -############################################################################## +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + from spack import * @@ -31,8 +12,9 @@ class Hmmer(Package): probabilistic models called profile hidden Markov models (profile HMMs). """ homepage = 'http://www.hmmer.org' - url = 'http://eddylab.org/software/hmmer3/3.1b2/hmmer-3.1b2.tar.gz' + url = 'http://eddylab.org/software/hmmer/hmmer-3.2.1.tar.gz' + version('3.2.1', '4e0ad5ed45462d4e36807d21e6d82b69') version('3.1b2', 'c8c141018bc0ccd7fc37b33f2b945d5f') version('3.0', '4cf685f3bc524ba5b5cdaaa070a83588') version('2.4i', 'dab234c87e026ac1de942450750acd20') @@ -45,14 +27,6 @@ class Hmmer(Package): depends_on('mpi', when='+mpi') depends_on('gsl', when='+gsl') - def url_for_version(self, version): - base_url = 'http://eddylab.org/software' - - if version >= Version('3.0'): - return '{0}/hmmer3/{1}/hmmer-{1}.tar.gz'.format(base_url, version) - else: - return '{0}/hmmer/{1}/hmmer-{1}.tar.gz'.format(base_url, version) - def install(self, spec, prefix): configure_args = [ '--prefix={0}'.format(prefix) |