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-rw-r--r--var/spack/repos/builtin/packages/lammps/package.py65
1 files changed, 56 insertions, 9 deletions
diff --git a/var/spack/repos/builtin/packages/lammps/package.py b/var/spack/repos/builtin/packages/lammps/package.py
index 5f96f150c7..509d17d2d6 100644
--- a/var/spack/repos/builtin/packages/lammps/package.py
+++ b/var/spack/repos/builtin/packages/lammps/package.py
@@ -1,4 +1,4 @@
-# Copyright 2013-2020 Lawrence Livermore National Security, LLC and other
+# Copyright 2013-2021 Lawrence Livermore National Security, LLC and other
# Spack Project Developers. See the top-level COPYRIGHT file for details.
#
# SPDX-License-Identifier: (Apache-2.0 OR MIT)
@@ -60,11 +60,19 @@ class Lammps(CMakePackage, CudaPackage):
supported_packages = ['asphere', 'body', 'class2', 'colloid', 'compress',
'coreshell', 'dipole', 'granular', 'kspace',
'kokkos', 'latte', 'manybody', 'mc', 'meam', 'misc',
- 'molecule', 'mpiio', 'peri', 'poems', 'python',
- 'qeq', 'replica', 'rigid', 'shock', 'snap', 'spin',
- 'srd', 'user-atc', 'user-h5md', 'user-lb',
- 'user-meamc', 'user-misc', 'user-netcdf', 'user-omp',
- 'user-reaxc', 'voronoi']
+ 'mliap', 'molecule', 'mpiio', 'opt', 'peri', 'poems',
+ 'python', 'qeq', 'replica', 'rigid', 'shock', 'snap',
+ 'spin', 'srd', 'user-atc', 'user-adios',
+ 'user-awpmd', 'user-bocs', 'user-cgsdk',
+ 'user-colvars', 'user-diffraction', 'user-dpd',
+ 'user-drude', 'user-eff', 'user-fep', 'user-h5md',
+ 'user-lb', 'user-manifold', 'user-meamc',
+ 'user-mesodpd', 'user-mesont', 'user-mgpt',
+ 'user-misc', 'user-mofff', 'user-netcdf', 'user-omp',
+ 'user-phonon', 'user-plumed', 'user-ptm', 'user-qtb',
+ 'user-reaction', 'user-reaxc', 'user-sdpd',
+ 'user-smd', 'user-smtbq', 'user-sph', 'user-tally',
+ 'user-uef', 'user-yaff', 'voronoi']
for pkg in supported_packages:
variant(pkg, default=False,
@@ -79,6 +87,8 @@ class Lammps(CMakePackage, CudaPackage):
description='Build with png support')
variant('ffmpeg', default=True,
description='Build with ffmpeg support')
+ variant('kim', default=True,
+ description='Build with KIM support')
variant('openmp', default=True, description='Build with OpenMP')
variant('opencl', default=False, description='Build with OpenCL')
variant('exceptions', default=False,
@@ -95,7 +105,6 @@ class Lammps(CMakePackage, CudaPackage):
depends_on('blas', when='+user-atc')
depends_on('lapack', when='+user-atc')
depends_on('opencl', when='+opencl')
-
depends_on('latte@1.0.1', when='@:20180222+latte')
depends_on('latte@1.1.1:', when='@20180316:20180628+latte')
depends_on('latte@1.2.1:', when='@20180629:20200505+latte')
@@ -107,10 +116,14 @@ class Lammps(CMakePackage, CudaPackage):
depends_on('mpi', when='+user-h5md')
depends_on('hdf5', when='+user-h5md')
depends_on('jpeg', when='+jpeg')
+ depends_on('kim-api', when='+kim')
depends_on('libpng', when='+png')
depends_on('ffmpeg', when='+ffmpeg')
depends_on('kokkos+deprecated_code+shared@3.0', when='@20200303+kokkos')
depends_on('kokkos+shared@3.1:', when='@20200505:+kokkos')
+ depends_on('adios2', when='+user-adios')
+ depends_on('plumed', when='+user-plumed')
+ depends_on('eigen@3:', when='+user-smd')
conflicts('+cuda', when='+opencl')
conflicts('+body', when='+poems@:20180628')
@@ -123,8 +136,22 @@ class Lammps(CMakePackage, CudaPackage):
conflicts('+user-misc', when='~manybody')
conflicts('%gcc@9:', when='@:20200303+openmp')
conflicts('+kokkos', when='@:20200227')
- conflicts('+meam', when='@20181212:')
- conflicts('+user-meamc', when='@:20181212')
+ conflicts(
+ '+meam', when='@20181212:',
+ msg='+meam was removed after @20181212, use +user-meamc instead')
+ conflicts(
+ '+user-meamc', when='@:20181212',
+ msg='+user-meamc only added @20181212, use +meam instead')
+ conflicts(
+ '+user-reaction', when='@:20200303',
+ msg='+user-reaction only supported for version 20200505 and later')
+ conflicts('+mliap', when='~snap')
+ conflicts(
+ '+adios +mpi', when='^adios2~mpi',
+ msg='With +adios, mpi setting for adios2 and lammps must be the same')
+ conflicts(
+ '+adios ~mpi', when='^adios2+mpi',
+ msg='With +adios, mpi setting for adios2 and lammps must be the same')
patch("lib.patch", when="@20170901")
patch("660.patch", when="@20170922")
@@ -181,13 +208,33 @@ class Lammps(CMakePackage, CudaPackage):
args.append('{0}=ON'.format(opt))
else:
args.append('{0}=OFF'.format(opt))
+ if '+kim' in spec:
+ args.append('-DPKG_KIM=ON')
if '+kspace' in spec:
if '^fftw' in spec:
args.append('-DFFT=FFTW3')
if '^mkl' in spec:
args.append('-DFFT=MKL')
+ if '^amdfftw' in spec:
+ fftw_prefix = spec['amdfftw'].prefix
+ args.append('-DFFTW_HOME={0}'.format(fftw_prefix))
+ args.append('-DFFTW_INCLUDE_DIRS={0}'
+ .format(fftw_prefix.include))
+ args.append('-DFFTW_LIBRARY_DIRS={0}'.format(fftw_prefix.lib))
if '+kokkos' in spec:
args.append('-DEXTERNAL_KOKKOS=ON')
+ if '+user-adios' in spec:
+ args.append('-DADIOS2_DIR={0}'.format(self.spec['adios2'].prefix))
+ if '+user-plumed' in spec:
+ args.append('-DDOWNLOAD_PLUMED=no')
+ if '+shared' in self.spec['plumed']:
+ args.append('-DPLUMED_MODE=shared')
+ else:
+ args.append('-DPLUMED_MODE=static')
+ if '+user-smd' in spec:
+ args.append('-DDOWNLOAD_EIGEN3=no')
+ args.append('-DEIGEN3_INCLUDE_DIR={0}'.format(
+ self.spec['eigen'].prefix.include))
return args