diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/meraculous/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/meraculous/package.py | 24 |
1 files changed, 12 insertions, 12 deletions
diff --git a/var/spack/repos/builtin/packages/meraculous/package.py b/var/spack/repos/builtin/packages/meraculous/package.py index 14220c4482..7780a69b4c 100644 --- a/var/spack/repos/builtin/packages/meraculous/package.py +++ b/var/spack/repos/builtin/packages/meraculous/package.py @@ -9,31 +9,31 @@ from spack.pkg.builtin.boost import Boost class Meraculous(CMakePackage, SourceforgePackage): """Meraculous is a while genome assembler for Next Generation Sequencing - data geared for large genomes.""" + data geared for large genomes.""" homepage = "http://jgi.doe.gov/data-and-tools/meraculous/" sourceforge_mirror_path = "meraculous20/Meraculous-v2.2.4.tar.gz" - git = "https://bitbucket.org/berkeleylab/genomics-meraculous2.git" + git = "https://bitbucket.org/berkeleylab/genomics-meraculous2.git" - version('2.2.5.1', branch='release-2.2.5.1') - version('2.2.4', sha256='3b4b8848232be902af9ebc77b38b83bcc531f12120115be089bdd6371ad2bf5b') + version("2.2.5.1", branch="release-2.2.5.1") + version("2.2.4", sha256="3b4b8848232be902af9ebc77b38b83bcc531f12120115be089bdd6371ad2bf5b") - depends_on('perl', type=('build', 'run')) - depends_on('boost@1.5.0:') + depends_on("perl", type=("build", "run")) + depends_on("boost@1.5.0:") # TODO: replace this with an explicit list of components of Boost, # for instance depends_on('boost +filesystem') # See https://github.com/spack/spack/pull/22303 for reference depends_on(Boost.with_default_variants) - depends_on('gnuplot@3.7:') - depends_on('perl-log-log4perl', type=('build', 'run')) + depends_on("gnuplot@3.7:") + depends_on("perl-log-log4perl", type=("build", "run")) - conflicts('%gcc@6.0.0:', when='@2.2.4') + conflicts("%gcc@6.0.0:", when="@2.2.4") def patch(self): - edit = FileFilter('CMakeLists.txt') + edit = FileFilter("CMakeLists.txt") edit.filter(r"-static-libstdc\+\+", "") def setup_run_environment(self, env): - env.set('MERACULOUS_ROOT', self.prefix) - env.prepend_path('PERL5LIB', self.prefix.lib) + env.set("MERACULOUS_ROOT", self.prefix) + env.prepend_path("PERL5LIB", self.prefix.lib) |