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+# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other
+# Spack Project Developers. See the top-level COPYRIGHT file for details.
+#
+# SPDX-License-Identifier: (Apache-2.0 OR MIT)
+
+from spack.package import *
+
+
+class Muscle5(MakefilePackage):
+ """MUSCLE is widely-used software for making multiple alignments of
+ biological sequences.
+ """
+
+ homepage = "https://drive5.com/muscle5/"
+ url = "https://github.com/rcedgar/muscle/archive/refs/tags/5.1.0.tar.gz"
+
+ maintainers("snehring")
+
+ version("5.1.0", sha256="2bba8b06e3ccabf6465fa26f459763b2029d7e7b9596881063e3aaba60d9e87d")
+
+ depends_on("sed", type="build")
+
+ build_directory = "src"
+
+ def install(self, spec, prefix):
+ mkdir(prefix.bin)
+ install("src/Linux/muscle", prefix.bin)