diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/netcdf-fortran/excessive_linking.patch')
| -rw-r--r-- | var/spack/repos/builtin/packages/netcdf-fortran/excessive_linking.patch | 312 |
1 files changed, 312 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/netcdf-fortran/excessive_linking.patch b/var/spack/repos/builtin/packages/netcdf-fortran/excessive_linking.patch new file mode 100644 index 0000000000..11e149081a --- /dev/null +++ b/var/spack/repos/builtin/packages/netcdf-fortran/excessive_linking.patch @@ -0,0 +1,312 @@ +--- a/config.h.in ++++ b/config.h.in +@@ -52,9 +52,6 @@ + /* Define to 1 if you have the <inttypes.h> header file. */ + #undef HAVE_INTTYPES_H + +-/* Define to 1 if you have the `curl' library (-lcurl). */ +-#undef HAVE_LIBCURL +- + /* Define to 1 if you have the `m' library (-lm). */ + #undef HAVE_LIBM + +--- a/configure ++++ b/configure +@@ -22122,6 +22122,14 @@ $as_echo "$as_me: checking types, headers, and functions" >&6;} + + # We must check for all these, because they may be used by the netCDF + # C library. ++# Removing the checks for some of the libraries because of issues ++# observed when they are detected, are not needed, and an attempt to ++# link against is made anyways. ++# See https://github.com/Unidata/netcdf-fortran/issues/164 ++# ++# Specifying LDFLAGS="$(nc-config --libs [--static])" should ++# let downstream developers link more reliably against libnetcdf. ++ + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for floor in -lm" >&5 + $as_echo_n "checking for floor in -lm... " >&6; } + if ${ac_cv_lib_m_floor+:} false; then : +@@ -22167,163 +22175,6 @@ _ACEOF + + fi + +-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for curl_easy_setopt in -lcurl" >&5 +-$as_echo_n "checking for curl_easy_setopt in -lcurl... " >&6; } +-if ${ac_cv_lib_curl_curl_easy_setopt+:} false; then : +- $as_echo_n "(cached) " >&6 +-else +- ac_check_lib_save_LIBS=$LIBS +-LIBS="-lcurl $LIBS" +-cat confdefs.h - <<_ACEOF >conftest.$ac_ext +-/* end confdefs.h. */ +- +-/* Override any GCC internal prototype to avoid an error. +- Use char because int might match the return type of a GCC +- builtin and then its argument prototype would still apply. */ +-#ifdef __cplusplus +-extern "C" +-#endif +-char curl_easy_setopt (); +-int +-main () +-{ +-return curl_easy_setopt (); +- ; +- return 0; +-} +-_ACEOF +-if ac_fn_c_try_link "$LINENO"; then : +- ac_cv_lib_curl_curl_easy_setopt=yes +-else +- ac_cv_lib_curl_curl_easy_setopt=no +-fi +-rm -f core conftest.err conftest.$ac_objext \ +- conftest$ac_exeext conftest.$ac_ext +-LIBS=$ac_check_lib_save_LIBS +-fi +-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_curl_curl_easy_setopt" >&5 +-$as_echo "$ac_cv_lib_curl_curl_easy_setopt" >&6; } +-if test "x$ac_cv_lib_curl_curl_easy_setopt" = xyes; then : +- cat >>confdefs.h <<_ACEOF +-#define HAVE_LIBCURL 1 +-_ACEOF +- +- LIBS="-lcurl $LIBS" +- +-fi +- +-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing deflate" >&5 +-$as_echo_n "checking for library containing deflate... " >&6; } +-if ${ac_cv_search_deflate+:} false; then : +- $as_echo_n "(cached) " >&6 +-else +- ac_func_search_save_LIBS=$LIBS +-cat confdefs.h - <<_ACEOF >conftest.$ac_ext +-/* end confdefs.h. */ +- +-/* Override any GCC internal prototype to avoid an error. +- Use char because int might match the return type of a GCC +- builtin and then its argument prototype would still apply. */ +-#ifdef __cplusplus +-extern "C" +-#endif +-char deflate (); +-int +-main () +-{ +-return deflate (); +- ; +- return 0; +-} +-_ACEOF +-for ac_lib in '' zlibwapi zlibstat zlib zlib1 z; do +- if test -z "$ac_lib"; then +- ac_res="none required" +- else +- ac_res=-l$ac_lib +- LIBS="-l$ac_lib $ac_func_search_save_LIBS" +- fi +- if ac_fn_c_try_link "$LINENO"; then : +- ac_cv_search_deflate=$ac_res +-fi +-rm -f core conftest.err conftest.$ac_objext \ +- conftest$ac_exeext +- if ${ac_cv_search_deflate+:} false; then : +- break +-fi +-done +-if ${ac_cv_search_deflate+:} false; then : +- +-else +- ac_cv_search_deflate=no +-fi +-rm conftest.$ac_ext +-LIBS=$ac_func_search_save_LIBS +-fi +-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_deflate" >&5 +-$as_echo "$ac_cv_search_deflate" >&6; } +-ac_res=$ac_cv_search_deflate +-if test "$ac_res" != no; then : +- test "$ac_res" = "none required" || LIBS="$ac_res $LIBS" +- +-fi +- +-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing SZ_Compress" >&5 +-$as_echo_n "checking for library containing SZ_Compress... " >&6; } +-if ${ac_cv_search_SZ_Compress+:} false; then : +- $as_echo_n "(cached) " >&6 +-else +- ac_func_search_save_LIBS=$LIBS +-cat confdefs.h - <<_ACEOF >conftest.$ac_ext +-/* end confdefs.h. */ +- +-/* Override any GCC internal prototype to avoid an error. +- Use char because int might match the return type of a GCC +- builtin and then its argument prototype would still apply. */ +-#ifdef __cplusplus +-extern "C" +-#endif +-char SZ_Compress (); +-int +-main () +-{ +-return SZ_Compress (); +- ; +- return 0; +-} +-_ACEOF +-for ac_lib in '' szip sz; do +- if test -z "$ac_lib"; then +- ac_res="none required" +- else +- ac_res=-l$ac_lib +- LIBS="-l$ac_lib $ac_func_search_save_LIBS" +- fi +- if ac_fn_c_try_link "$LINENO"; then : +- ac_cv_search_SZ_Compress=$ac_res +-fi +-rm -f core conftest.err conftest.$ac_objext \ +- conftest$ac_exeext +- if ${ac_cv_search_SZ_Compress+:} false; then : +- break +-fi +-done +-if ${ac_cv_search_SZ_Compress+:} false; then : +- +-else +- ac_cv_search_SZ_Compress=no +-fi +-rm conftest.$ac_ext +-LIBS=$ac_func_search_save_LIBS +-fi +-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_SZ_Compress" >&5 +-$as_echo "$ac_cv_search_SZ_Compress" >&6; } +-ac_res=$ac_cv_search_SZ_Compress +-if test "$ac_res" != no; then : +- test "$ac_res" = "none required" || LIBS="$ac_res $LIBS" +- +-fi +- + { $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing dlopen" >&5 + $as_echo_n "checking for library containing dlopen... " >&6; } + if ${ac_cv_search_dlopen+:} false; then : +@@ -22380,118 +22231,6 @@ if test "$ac_res" != no; then : + + fi + +-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing H5Fflush" >&5 +-$as_echo_n "checking for library containing H5Fflush... " >&6; } +-if ${ac_cv_search_H5Fflush+:} false; then : +- $as_echo_n "(cached) " >&6 +-else +- ac_func_search_save_LIBS=$LIBS +-cat confdefs.h - <<_ACEOF >conftest.$ac_ext +-/* end confdefs.h. */ +- +-/* Override any GCC internal prototype to avoid an error. +- Use char because int might match the return type of a GCC +- builtin and then its argument prototype would still apply. */ +-#ifdef __cplusplus +-extern "C" +-#endif +-char H5Fflush (); +-int +-main () +-{ +-return H5Fflush (); +- ; +- return 0; +-} +-_ACEOF +-for ac_lib in '' hdf5dll hdf5; do +- if test -z "$ac_lib"; then +- ac_res="none required" +- else +- ac_res=-l$ac_lib +- LIBS="-l$ac_lib $ac_func_search_save_LIBS" +- fi +- if ac_fn_c_try_link "$LINENO"; then : +- ac_cv_search_H5Fflush=$ac_res +-fi +-rm -f core conftest.err conftest.$ac_objext \ +- conftest$ac_exeext +- if ${ac_cv_search_H5Fflush+:} false; then : +- break +-fi +-done +-if ${ac_cv_search_H5Fflush+:} false; then : +- +-else +- ac_cv_search_H5Fflush=no +-fi +-rm conftest.$ac_ext +-LIBS=$ac_func_search_save_LIBS +-fi +-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_H5Fflush" >&5 +-$as_echo "$ac_cv_search_H5Fflush" >&6; } +-ac_res=$ac_cv_search_H5Fflush +-if test "$ac_res" != no; then : +- test "$ac_res" = "none required" || LIBS="$ac_res $LIBS" +- +-fi +- +-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for library containing H5DSis_scale" >&5 +-$as_echo_n "checking for library containing H5DSis_scale... " >&6; } +-if ${ac_cv_search_H5DSis_scale+:} false; then : +- $as_echo_n "(cached) " >&6 +-else +- ac_func_search_save_LIBS=$LIBS +-cat confdefs.h - <<_ACEOF >conftest.$ac_ext +-/* end confdefs.h. */ +- +-/* Override any GCC internal prototype to avoid an error. +- Use char because int might match the return type of a GCC +- builtin and then its argument prototype would still apply. */ +-#ifdef __cplusplus +-extern "C" +-#endif +-char H5DSis_scale (); +-int +-main () +-{ +-return H5DSis_scale (); +- ; +- return 0; +-} +-_ACEOF +-for ac_lib in '' hdf5_hldll hdf5_hl; do +- if test -z "$ac_lib"; then +- ac_res="none required" +- else +- ac_res=-l$ac_lib +- LIBS="-l$ac_lib $ac_func_search_save_LIBS" +- fi +- if ac_fn_c_try_link "$LINENO"; then : +- ac_cv_search_H5DSis_scale=$ac_res +-fi +-rm -f core conftest.err conftest.$ac_objext \ +- conftest$ac_exeext +- if ${ac_cv_search_H5DSis_scale+:} false; then : +- break +-fi +-done +-if ${ac_cv_search_H5DSis_scale+:} false; then : +- +-else +- ac_cv_search_H5DSis_scale=no +-fi +-rm conftest.$ac_ext +-LIBS=$ac_func_search_save_LIBS +-fi +-{ $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_search_H5DSis_scale" >&5 +-$as_echo "$ac_cv_search_H5DSis_scale" >&6; } +-ac_res=$ac_cv_search_H5DSis_scale +-if test "$ac_res" != no; then : +- test "$ac_res" = "none required" || LIBS="$ac_res $LIBS" +- +-fi +- + + # Find the netCDF header and library. + for ac_header in netcdf.h |