diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/orthofinder/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/orthofinder/package.py | 32 |
1 files changed, 16 insertions, 16 deletions
diff --git a/var/spack/repos/builtin/packages/orthofinder/package.py b/var/spack/repos/builtin/packages/orthofinder/package.py index 6a8a7e2100..f686f2b4fd 100644 --- a/var/spack/repos/builtin/packages/orthofinder/package.py +++ b/var/spack/repos/builtin/packages/orthofinder/package.py @@ -23,19 +23,19 @@ class Orthofinder(Package): homepage = "https://github.com/davidemms/OrthoFinder" url = "https://github.com/davidemms/OrthoFinder/releases/download/2.5.2/OrthoFinder_source.tar.gz" - version('2.5.4', sha256='a735c81999e8e3026ad62536b14e5b0391c9fc632f872f99857936ac60003ba5') - version('2.5.2', sha256='e0752b66866e23a11f0592e880fac5f67258f9cf926f926dec8849564c41b8f7') - version('2.2.0', sha256='375f711086b44e2118d7d460821294744245e254e5fa2151dfe73100c0707a8c') + version("2.5.4", sha256="a735c81999e8e3026ad62536b14e5b0391c9fc632f872f99857936ac60003ba5") + version("2.5.2", sha256="e0752b66866e23a11f0592e880fac5f67258f9cf926f926dec8849564c41b8f7") + version("2.2.0", sha256="375f711086b44e2118d7d460821294744245e254e5fa2151dfe73100c0707a8c") - depends_on('py-numpy', type='run') - depends_on('py-scipy', type='run') - depends_on('diamond', type='run') - depends_on('blast-plus', type='run') - depends_on('mcl', type='run') - depends_on('fastme', type='run') + depends_on("py-numpy", type="run") + depends_on("py-scipy", type="run") + depends_on("diamond", type="run") + depends_on("blast-plus", type="run") + depends_on("mcl", type="run") + depends_on("fastme", type="run") def url_for_version(self, version): - if '@:2.3.6' in self.spec: + if "@:2.3.6" in self.spec: url = "https://github.com/davidemms/OrthoFinder/releases/download/{0}/OrthoFinder-{0}_source.tar.gz" return url.format(version) else: @@ -43,13 +43,13 @@ class Orthofinder(Package): return url.format(version) def install(self, spec, prefix): - if '@2.2.0' in spec: - install_tree('./orthofinder', prefix.bin) + if "@2.2.0" in spec: + install_tree("./orthofinder", prefix.bin) else: - install_tree('.', prefix.bin) + install_tree(".", prefix.bin) shutil.rmtree(prefix.bin.scripts_of.bin) - os.rename('%s/orthofinder.py' % prefix.bin, '%s/orthofinder' % prefix.bin) + os.rename("%s/orthofinder.py" % prefix.bin, "%s/orthofinder" % prefix.bin) def setup_run_environment(self, env): - env.prepend_path('PATH', prefix.bin) - env.prepend_path('PATH', prefix.bin.tools) + env.prepend_path("PATH", prefix.bin) + env.prepend_path("PATH", prefix.bin.tools) |