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Diffstat (limited to 'var/spack/repos/builtin/packages/pandaseq/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/pandaseq/package.py | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/pandaseq/package.py b/var/spack/repos/builtin/packages/pandaseq/package.py new file mode 100644 index 0000000000..877a55dd6b --- /dev/null +++ b/var/spack/repos/builtin/packages/pandaseq/package.py @@ -0,0 +1,30 @@ +# Copyright 2013-2018 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack import * + + +class Pandaseq(AutotoolsPackage): + """PANDASEQ is a program to align Illumina reads, optionally with PCR + primers embedded in the sequence, and reconstruct an overlapping + sequence.""" + + homepage = "https://github.com/neufeld/pandaseq" + url = "https://github.com/neufeld/pandaseq/archive/v2.11.tar.gz" + + version('2.11', 'a8ae0e938bac592fc07dfa668147d80b') + version('2.10', '5b5b04c9b693a999f10a9c9bd643f068') + + depends_on('autoconf', type='build') + depends_on('automake', type='build') + depends_on('libtool', type=('build', 'link')) + depends_on('m4', type='build') + depends_on('zlib', type='build') + depends_on('pkgconfig', type='build') + depends_on('bzip2', type='link') + + def autoreconf(self, spec, prefix): + bash = which('bash') + bash('./autogen.sh') |