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-rw-r--r--var/spack/repos/builtin/packages/plumed/package.py28
1 files changed, 28 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/plumed/package.py b/var/spack/repos/builtin/packages/plumed/package.py
index 32571455eb..abb03e0770 100644
--- a/var/spack/repos/builtin/packages/plumed/package.py
+++ b/var/spack/repos/builtin/packages/plumed/package.py
@@ -22,6 +22,7 @@
# License along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
##############################################################################
+import subprocess
from spack import *
@@ -55,6 +56,33 @@ class Plumed(Package):
depends_on('mpi', when='+mpi')
depends_on('gsl', when='+gsl')
+ # Dictionary mapping PLUMED versions to the patches it provides
+ # interactively
+ plumed_patches = {
+ '2.2.3': {
+ 'amber-14': '1',
+ 'gromacs-4.5.7': '2',
+ 'gromacs-4.6.7': '3',
+ 'gromacs-5.0.7': '4',
+ 'gromacs-5.1.2': '5',
+ 'lammps-6Apr13': '6',
+ 'namd-2.8': '7',
+ 'namd-2.9': '8',
+ 'espresso-5.0.2': '9'
+ }
+ }
+
+ def apply_patch(self, other):
+ plumed = subprocess.Popen(
+ [join_path(self.spec.prefix.bin, 'plumed'), 'patch', '-p'],
+ stdin=subprocess.PIPE
+ )
+ opts = Plumed.plumed_patches[str(self.version)]
+ search = '{0.name}-{0.version}'.format(other)
+ choice = opts[search] + '\n'
+ plumed.stdin.write(choice)
+ plumed.wait()
+
def setup_dependent_package(self, module, ext_spec):
# Make plumed visible from dependent packages
module.plumed = Executable(join_path(self.spec.prefix.bin, 'plumed'))