diff options
Diffstat (limited to 'var/spack/repos/builtin/packages/prinseq-lite/package.py')
| -rw-r--r-- | var/spack/repos/builtin/packages/prinseq-lite/package.py | 32 |
1 files changed, 14 insertions, 18 deletions
diff --git a/var/spack/repos/builtin/packages/prinseq-lite/package.py b/var/spack/repos/builtin/packages/prinseq-lite/package.py index 8a61211e93..9f0eadb398 100644 --- a/var/spack/repos/builtin/packages/prinseq-lite/package.py +++ b/var/spack/repos/builtin/packages/prinseq-lite/package.py @@ -11,31 +11,27 @@ class PrinseqLite(Package): sequence data in FASTA or FASTQ format.""" homepage = "http://prinseq.sourceforge.net" - url = "https://sourceforge.net/projects/prinseq/files/standalone/prinseq-lite-0.20.4.tar.gz" + url = "https://sourceforge.net/projects/prinseq/files/standalone/prinseq-lite-0.20.4.tar.gz" - version('0.20.4', sha256='9b5e0dce3b7f02f09e1cc7e8a2dd77c0b133e5e35529d570ee901f53ebfeb56f') + version("0.20.4", sha256="9b5e0dce3b7f02f09e1cc7e8a2dd77c0b133e5e35529d570ee901f53ebfeb56f") - variant('nopca', default=True, description="Graphs version without PCA") + variant("nopca", default=True, description="Graphs version without PCA") - depends_on('perl', type='run') - depends_on('perl-cairo', type='run') - depends_on('perl-digest-md5', type='run') - depends_on('perl-json', type='run') + depends_on("perl", type="run") + depends_on("perl-cairo", type="run") + depends_on("perl-digest-md5", type="run") + depends_on("perl-json", type="run") def install(self, spec, prefix): mkdirp(prefix.bin) - filter_file(r'#!/usr/bin/perl', - '#!/usr/bin/env perl', - 'prinseq-graphs-noPCA.pl') + filter_file(r"#!/usr/bin/perl", "#!/usr/bin/env perl", "prinseq-graphs-noPCA.pl") - filter_file(r'#!/usr/bin/perl', - '#!/usr/bin/env perl', - 'prinseq-lite.pl') + filter_file(r"#!/usr/bin/perl", "#!/usr/bin/env perl", "prinseq-lite.pl") - install('prinseq-graphs-noPCA.pl', prefix.bin) - install('prinseq-lite.pl', prefix.bin) + install("prinseq-graphs-noPCA.pl", prefix.bin) + install("prinseq-lite.pl", prefix.bin) - chmod = which('chmod') - chmod('+x', join_path(self.prefix.bin, 'prinseq-graphs-noPCA.pl')) - chmod('+x', join_path(self.prefix.bin, 'prinseq-lite.pl')) + chmod = which("chmod") + chmod("+x", join_path(self.prefix.bin, "prinseq-graphs-noPCA.pl")) + chmod("+x", join_path(self.prefix.bin, "prinseq-lite.pl")) |